Strain Fitness in Shewanella loihica PV-4 around Shew_2798

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
3,312,088	-		Shew_2797	0.64	+0.2
3,312,340	+		Shew_2797	0.86	+0.4
3,312,389	+		Shew_2797	0.90	+0.1
3,312,787	+		Shew_2798	0.11	-1.3
3,312,787	+		Shew_2798	0.11	+1.4
3,312,795	-		Shew_2798	0.11	+0.4
3,312,883	-		Shew_2798	0.15	+0.6
3,312,983	-		Shew_2798	0.19	+1.4
3,313,085	-		Shew_2798	0.23	-0.4
3,313,123	+		Shew_2798	0.24	+2.8
3,313,156	+		Shew_2798	0.25	-0.4
3,313,342	-		Shew_2798	0.33	+0.6
3,313,727	-		Shew_2798	0.48	-0.1
3,313,843	+		Shew_2798	0.53	+1.0
3,313,851	-		Shew_2798	0.53	+1.6
3,313,855	+		Shew_2798	0.54	-1.2
3,314,079	-		Shew_2798	0.63	+0.1
3,314,893	+				+0.4
3,314,901	-				-0.4
3,314,904	+				-0.1
3,314,927	-				+0.0
3,314,927	-				+1.2
3,315,139	-	torD	Shew_2799	0.16	+2.0
3,315,402	+	torD	Shew_2799	0.57	+0.6
3,315,593	+	torD	Shew_2799	0.87	+1.1
3,315,812	+		Shew_2800	0.10	+0.6
3,315,858	-		Shew_2800	0.14	+1.1
3,315,938	+		Shew_2800	0.21	+1.1
3,315,956	-		Shew_2800	0.22	-0.1