Strain Fitness in Shewanella loihica PV-4 around Shew_2751
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,251,213 | - | Shew_2750 | 0.31 | -0.1 | |
3,251,701 | + | Shew_2750 | 0.82 | +0.0 | |
3,251,714 | + | Shew_2750 | 0.83 | +0.1 | |
3,251,787 | + | +0.8 | |||
3,251,794 | + | +0.5 | |||
3,252,143 | - | -1.4 | |||
3,252,143 | - | -0.4 | |||
3,252,143 | - | -2.1 | |||
3,252,237 | + | -2.6 | |||
3,252,342 | - | rdgC | Shew_2751 | 0.18 | -2.1 |
3,252,475 | - | rdgC | Shew_2751 | 0.33 | -3.4 |
3,253,669 | - | Shew_2752 | 0.24 | -2.0 | |
3,253,856 | - | Shew_2752 | 0.34 | -0.6 |
Or see this region's nucleotide sequence