Strain Fitness in Shewanella loihica PV-4 around Shew_2677

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
3,169,108	+				+0.1
3,169,116	-				+0.5
3,169,129	+				+0.4
3,169,131	-				+0.1
3,169,143	-				+1.0
3,169,187	+				+0.8
3,169,195	-				-2.0
3,169,195	-				-0.3
3,169,202	-				+0.5
3,169,215	+				-0.5
3,169,220	-				-0.2
3,169,225	-				+0.3
3,169,236	-				+0.2
3,169,253	-				-0.4
3,169,268	+				-0.8
3,169,268	+				+0.1
3,169,268	+				+1.9
3,169,268	+				-0.6
3,169,268	+				+0.0
3,169,268	+				+0.2
3,169,268	+				-0.8
3,169,268	+				-1.0
3,169,268	+				-1.1
3,169,269	+				-0.3
3,169,276	-				+1.4
3,169,276	-				+0.1
3,169,276	-				-0.8
3,169,276	-				-0.1
3,169,276	-				+0.5
3,169,276	-				+0.2
3,169,276	-				+0.1
3,169,276	-				-1.2
3,169,277	-				-1.0
3,169,291	-				-0.2
3,169,339	-				+1.6
3,169,339	-				+0.1
3,169,339	-				-0.6
3,169,384	-				-2.8
3,169,384	-				-1.8
3,169,398	+				+0.5
3,169,517	-				+1.3
3,169,570	+				+0.9
3,169,570	+				-0.5
3,169,706	+				-0.6
3,169,716	+				+0.9
3,169,760	+				-2.6
3,169,761	+				+0.1
3,169,768	-				+3.1
3,169,768	-				-1.4
3,169,789	+				-0.9
3,169,861	+				+1.7
3,169,864	-				+0.6
3,169,869	+				-3.4
3,169,885	-				-0.4
3,169,914	+				-0.3
3,169,916	-				-3.6
3,169,917	-				+1.1
3,169,956	+				-0.4
3,169,965	+				+0.5
3,169,981	-				+0.4
3,170,007	+				+2.2
3,170,007	+				-0.1
3,170,011	+				+0.0
3,170,015	-				+0.9
3,170,015	-				-0.7
3,170,015	-				-0.8
3,170,021	-				+0.7
3,170,024	-				-0.2
3,170,055	+				+0.0
3,170,110	+				+0.1
3,170,110	+				-1.0
3,170,110	+				-2.4
3,170,110	+				-1.4
3,170,110	+				+0.2
3,170,110	+				-0.1
3,170,110	+				+0.2
3,170,110	+				+0.0
3,170,118	-				+0.2
3,170,118	-				+1.6
3,170,118	-				-0.6
3,170,118	-				+0.1
3,170,118	-				-1.1
3,170,118	-				+0.4
3,170,118	-				+0.1
3,170,118	-				+0.0
3,170,118	-				+0.7
3,170,118	-				-0.2
3,170,118	-				-0.6
3,170,118	-				-1.4
3,170,118	-				+1.9
3,170,130	+				+0.4
3,170,130	+				-0.1
3,170,130	+				-1.5
3,170,130	+				-0.1
3,170,130	+				-1.7
3,170,130	+				-2.6
3,170,130	+				-2.7
3,170,130	+				-0.6
3,170,138	-				-1.1
3,170,138	-				+1.0
3,170,138	-				-1.3
3,170,138	-				-0.2
3,170,138	-				-1.7
3,170,138	-				+0.1
3,170,138	-				-0.4
3,170,138	-				-1.7
3,170,138	-				-0.5
3,170,138	-				-1.0
3,170,138	-				-2.0
3,170,138	-				-0.4
3,170,144	+				+0.8
3,170,158	+				-0.4
3,170,170	-				+1.0
3,170,179	-		Shew_2677	0.11	-2.0
3,170,179	-		Shew_2677	0.11	+0.5
3,170,188	+		Shew_2677	0.12	+0.2
3,170,189	+		Shew_2677	0.12	-2.0
3,170,189	+		Shew_2677	0.12	+0.5
3,170,189	+		Shew_2677	0.12	+1.0
3,170,196	-		Shew_2677	0.13	-0.2
3,170,196	-		Shew_2677	0.13	-3.4
3,170,196	-		Shew_2677	0.13	+0.2
3,170,224	+		Shew_2677	0.17	+2.8
3,170,231	-		Shew_2677	0.18	+0.2
3,170,231	+		Shew_2677	0.18	-1.4
3,170,231	+		Shew_2677	0.18	+1.4
3,170,231	+		Shew_2677	0.18	-0.2
3,170,231	+		Shew_2677	0.18	+0.5
3,170,231	+		Shew_2677	0.18	+0.0
3,170,239	-		Shew_2677	0.19	-0.2
3,170,239	-		Shew_2677	0.19	-0.8
3,170,239	-		Shew_2677	0.19	+0.8
3,170,239	-		Shew_2677	0.19	+1.8
3,170,239	-		Shew_2677	0.19	+0.4
3,170,239	-		Shew_2677	0.19	-0.6
3,170,239	-		Shew_2677	0.19	+0.8
3,170,239	-		Shew_2677	0.19	-2.3
3,170,239	-		Shew_2677	0.19	-0.4
3,170,239	-		Shew_2677	0.19	-2.7
3,170,239	-		Shew_2677	0.19	+1.9
3,170,239	-		Shew_2677	0.19	-0.5
3,170,239	-		Shew_2677	0.19	-1.1
3,170,243	+		Shew_2677	0.19	-0.1
3,170,244	+		Shew_2677	0.19	+0.9
3,170,244	+		Shew_2677	0.19	+0.4
3,170,274	-		Shew_2677	0.23	-0.4
3,170,274	-		Shew_2677	0.23	+0.6
3,170,319	-		Shew_2677	0.29	+1.1
3,170,373	+		Shew_2677	0.36	+0.1
3,170,420	+		Shew_2677	0.42	+0.7
3,170,432	+		Shew_2677	0.44	-1.4
3,170,509	-		Shew_2677	0.54	-0.4
3,170,552	-		Shew_2677	0.59	-2.4
3,170,657	-		Shew_2677	0.73	+0.1
3,170,746	-		Shew_2677	0.84	+0.4
3,170,788	-		Shew_2677	0.90	-0.2
3,171,277	+		Shew_2678	0.42	+0.1
3,171,381	+		Shew_2678	0.53	-0.2
3,171,457	+		Shew_2678	0.61	-0.8
3,171,465	-		Shew_2678	0.62	-0.6
3,171,613	-		Shew_2678	0.78	-1.1
3,171,632	-		Shew_2678	0.80	+0.3
3,171,663	+		Shew_2678	0.83	+0.4
3,171,835	-				+0.7