Strain Fitness in Shewanella loihica PV-4 around Shew_2581

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
3,042,468	+		Shew_2580	0.66	+0.4
3,042,628	-		Shew_2580	0.74	+0.7
3,042,628	+		Shew_2580	0.74	+0.1
3,042,684	+		Shew_2580	0.77	+0.5
3,042,692	-		Shew_2580	0.77	+0.8
3,042,737	-		Shew_2580	0.80	-1.1
3,042,759	+		Shew_2580	0.81	-3.4
3,042,999	+				+0.9
3,042,999	+				+0.8
3,043,373	-				-0.3
3,043,374	-				+0.4
3,043,389	+				-1.4
3,043,418	+				-0.3
3,043,532	+				+0.9
3,043,618	-		Shew_2581	0.13	+0.7
3,043,712	-		Shew_2581	0.18	+0.5
3,043,814	+		Shew_2581	0.22	+1.4
3,043,814	+		Shew_2581	0.22	+0.2
3,043,814	+		Shew_2581	0.22	+1.0
3,043,822	-		Shew_2581	0.23	+1.0
3,044,144	+		Shew_2581	0.38	-0.7
3,044,238	+		Shew_2581	0.42	-1.3
3,044,350	-		Shew_2581	0.47	-0.4
3,044,565	+		Shew_2581	0.57	+0.1
3,044,675	-		Shew_2581	0.62	-1.4
3,044,977	-		Shew_2581	0.77	+1.7
3,045,067	-		Shew_2581	0.81	-2.9
3,045,067	-		Shew_2581	0.81	-0.4
3,045,385	+				+1.5
3,045,387	+				+0.5
3,045,457	+				+0.3
3,045,592	-				+0.7
3,045,790	+		Shew_2582	0.13	+0.4
3,045,839	+		Shew_2582	0.16	-0.6