Strain Fitness in Shewanella loihica PV-4 around Shew_2550
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,006,936 | + | Shew_2549 | 0.14 | +1.6 | |
| 3,007,225 | + | Shew_2549 | 0.61 | -0.0 | |
| 3,008,726 | - | Shew_2551 | 0.51 | +0.6 | |
| 3,008,795 | + | Shew_2551 | 0.58 | -1.4 | |
| 3,008,806 | + | Shew_2551 | 0.59 | -0.6 | |
| 3,008,847 | - | Shew_2551 | 0.63 | -1.3 | |
| 3,009,230 | - | -0.8 | |||
| 3,009,241 | - | -0.6 |
Or see this region's nucleotide sequence