Strain Fitness in Shewanella loihica PV-4 around Shew_2307
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,702,186 | - | Shew_2306 | 0.51 | +1.9 | |
| 2,702,738 | + | -1.4 | |||
| 2,702,877 | + | +2.0 | |||
| 2,702,894 | - | +0.4 | |||
| 2,703,446 | - | Shew_2307 | 0.23 | +0.9 | |
| 2,703,602 | + | Shew_2307 | 0.29 | +0.6 | |
| 2,703,797 | + | Shew_2307 | 0.36 | +0.6 | |
| 2,704,050 | - | Shew_2307 | 0.46 | +0.7 | |
| 2,704,318 | + | Shew_2307 | 0.56 | +1.6 | |
| 2,704,565 | - | Shew_2307 | 0.65 | +0.2 | |
| 2,704,731 | + | Shew_2307 | 0.71 | -2.7 | |
| 2,704,877 | - | Shew_2307 | 0.76 | +1.0 | |
| 2,704,931 | - | Shew_2307 | 0.78 | +1.4 | |
| 2,705,013 | + | Shew_2307 | 0.82 | +0.4 | |
| 2,705,091 | + | Shew_2307 | 0.84 | +1.3 |
Or see this region's nucleotide sequence