Strain Fitness in Shewanella loihica PV-4 around Shew_2295

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
2,683,801	+		Shew_2294	0.84	+1.8
2,683,804	-		Shew_2294	0.84	-2.7
2,683,872	-		Shew_2294	0.87	+1.7
2,683,908	+		Shew_2294	0.89	+1.6
2,684,021	+				+0.0
2,684,042	+				+0.0
2,684,044	+				-2.0
2,684,060	+				-0.1
2,684,060	+				-1.6
2,684,065	+				-0.4
2,684,068	-				-0.1
2,684,068	-				+0.4
2,684,068	-				+0.7
2,684,068	-				-0.1
2,684,068	-				-1.0
2,684,079	+				-1.0
2,684,132	-				+0.1
2,684,182	-				-3.0
2,684,209	+				+1.0
2,684,209	+				+1.2
2,684,217	-				+0.6
2,684,217	-				-2.2
2,684,217	-				+0.4
2,684,217	-				+0.3
2,684,217	-				+0.9
2,684,231	-				+0.1
2,684,331	-				+1.2
2,684,331	-				-0.2
2,684,339	+				-0.2
2,684,346	-				-0.0
2,684,346	-				+0.4
2,684,370	+				+0.5
2,684,371	+				-0.8
2,684,379	-				+0.2
2,684,380	+				-0.6
2,684,380	+				+0.0
2,684,380	+				-2.0
2,684,380	+				-1.4
2,684,380	+				-2.7
2,684,380	+				+1.6
2,684,380	+				+0.1
2,684,380	+				+0.2
2,684,380	+				+0.4
2,684,380	+				-0.2
2,684,380	+				-2.0
2,684,380	+				+0.4
2,684,380	+				-2.5
2,684,380	+				-3.7
2,684,380	+				-0.4
2,684,380	+				-3.4
2,684,380	+				-1.7
2,684,380	+				+0.8
2,684,380	+				-3.0
2,684,380	+				-0.4
2,684,380	+				-0.0
2,684,380	+				+0.3
2,684,380	+				+0.4
2,684,380	+				-3.2
2,684,380	+				-0.2
2,684,380	+				+0.4
2,684,380	+				-2.0
2,684,380	+				+1.2
2,684,380	+				+0.9
2,684,380	+				-2.0
2,684,380	+				+0.2
2,684,380	+				+0.5
2,684,380	+				+0.6
2,684,388	-				+0.6
2,684,388	-				-2.4
2,684,388	-				-0.3
2,684,388	-				+0.1
2,684,388	-				-3.0
2,684,388	-				+0.1
2,684,388	-				+0.3
2,684,388	-				+1.6
2,684,388	-				-0.0
2,684,388	-				+0.5
2,684,388	-				+1.0
2,684,388	-				+0.2
2,684,388	-				+1.2
2,684,388	-				-0.2
2,684,388	-				-2.4
2,684,388	-				-0.4
2,684,388	-				-0.7
2,684,388	-				-1.4
2,684,388	-				+0.8
2,684,388	-				-0.4
2,684,388	-				-1.5
2,684,388	-				+0.3
2,684,388	-				-0.5
2,684,388	-				+0.4
2,684,388	-				+0.0
2,684,388	-				-1.2
2,684,394	+				+0.4
2,684,410	-				-3.2
2,684,411	-				-1.0
2,684,503	+				+0.6
2,684,604	+		Shew_2295	0.15	+0.5
2,684,612	-		Shew_2295	0.16	+0.4
2,684,834	+		Shew_2295	0.42	-1.0
2,684,842	-		Shew_2295	0.43	-0.7
2,684,842	-		Shew_2295	0.43	-1.2
2,684,842	-		Shew_2295	0.43	+0.7
2,684,847	+		Shew_2295	0.43	+0.5
2,684,969	+		Shew_2295	0.57	+0.9
2,684,969	+		Shew_2295	0.57	-0.3
2,684,977	-		Shew_2295	0.58	-1.3
2,684,977	-		Shew_2295	0.58	+0.2
2,684,977	-		Shew_2295	0.58	-2.7
2,685,231	+		Shew_2295	0.87	-0.3
2,685,244	+		Shew_2295	0.88	+0.6
2,685,253	-		Shew_2295	0.89	-1.9
2,685,347	+				-0.4
2,685,355	-				+0.2
2,685,355	-				-2.4
2,685,365	-				+0.6
2,685,453	+				-0.9
2,685,671	-				+0.4
2,685,709	+				-0.2
2,685,709	+				+0.1
2,685,709	+				-0.5
2,685,709	+				+0.0
2,685,709	+				+0.2
2,685,709	+				+0.4
2,685,714	+				+1.0
2,685,717	-				-0.4
2,685,722	-				-3.4
2,685,722	-				-2.7
2,685,737	+				-0.4
2,685,737	-				-1.0
2,685,750	+				+1.2
2,685,789	-				-1.1
2,685,789	-				-3.2
2,685,807	+				+1.2
2,685,807	+				+0.9
2,685,807	+				-0.7
2,685,807	+				+0.2
2,685,815	-				+0.5
2,685,815	-				+0.1
2,685,817	+				+1.3
2,685,825	-				+1.0
2,685,981	-		Shew_2296	0.11	+0.1
2,686,091	-		Shew_2296	0.15	-0.4
2,686,169	+		Shew_2296	0.18	+0.8