Strain Fitness in Shewanella loihica PV-4 around Shew_2276

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
2,658,197	+				+0.3
2,658,211	+				+0.9
2,658,242	+				+0.4
2,658,242	+				+0.1
2,658,242	+				+0.4
2,658,252	+				-0.2
2,658,252	+				-0.6
2,658,252	+				-1.4
2,658,252	+				+0.2
2,658,252	+				-0.1
2,658,252	+				+0.5
2,658,252	+				-0.3
2,658,260	-				-0.2
2,658,260	-				+0.3
2,658,260	-				+0.6
2,658,260	-				+0.2
2,658,260	-				+1.7
2,658,260	-				-0.7
2,658,260	-				+0.8
2,658,260	-				-0.6
2,658,268	+				+0.9
2,658,268	+				+0.1
2,658,268	+				-1.0
2,658,268	+				-0.2
2,658,272	-				+0.3
2,658,273	+				+0.8
2,658,276	-				-3.5
2,658,276	-				+0.0
2,658,279	+				+0.2
2,658,279	+				-1.0
2,658,279	+				-2.0
2,658,279	+				-0.0
2,658,279	+				-0.4
2,658,281	-				+0.9
2,658,287	+				+0.0
2,658,287	-				+0.6
2,658,287	-				+0.2
2,658,287	-				+0.5
2,658,288	+				-0.4
2,658,309	+				+1.5
2,658,328	-				+0.9
2,658,328	-				-0.6
2,658,352	+		Shew_2275	0.11	+0.3
2,658,352	-		Shew_2275	0.11	+0.3
2,658,357	+		Shew_2275	0.12	+0.4
2,658,357	+		Shew_2275	0.12	+0.1
2,658,357	+		Shew_2275	0.12	+0.8
2,658,357	+		Shew_2275	0.12	-0.5
2,658,365	-		Shew_2275	0.13	-0.2
2,658,365	-		Shew_2275	0.13	+0.8
2,658,370	-		Shew_2275	0.14	-3.2
2,658,370	-		Shew_2275	0.14	+0.7
2,658,370	-		Shew_2275	0.14	+1.0
2,658,370	-		Shew_2275	0.14	+0.4
2,658,403	+		Shew_2275	0.18	+0.0
2,658,406	-		Shew_2275	0.18	-0.7
2,658,504	+		Shew_2275	0.30	+0.6
2,658,667	+		Shew_2275	0.51	+0.5
2,658,752	+		Shew_2275	0.62	+1.2
2,658,809	+		Shew_2275	0.69	+0.8
2,658,809	+		Shew_2275	0.69	+0.5
2,659,078	+				+0.0
2,659,097	+				+0.7
2,659,105	-				+0.3
2,659,105	-				-0.2
2,659,105	-				+0.5
2,659,112	+				-0.1
2,659,286	+		Shew_2276	0.11	+0.4
2,659,364	-		Shew_2276	0.19	-0.6
2,659,432	-		Shew_2276	0.26	+0.5
2,659,489	+		Shew_2276	0.32	-0.5
2,659,497	-		Shew_2276	0.32	-0.7
2,659,497	-		Shew_2276	0.32	+0.2
2,659,497	-		Shew_2276	0.32	-0.7
2,659,737	-		Shew_2276	0.57	+0.3
2,659,942	+		Shew_2276	0.78	-2.7
2,659,970	+		Shew_2276	0.81	-0.4
2,660,156	-				-0.1
2,660,240	-				+1.1
2,660,448	-		Shew_2277	0.49	-0.5
2,660,524	+		Shew_2277	0.66	+0.7
2,660,532	-		Shew_2277	0.68	-0.0
2,660,629	+		Shew_2277	0.90	-0.3