Strain Fitness in Shewanella loihica PV-4 around Shew_2245

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
2,623,805	-				+0.3
2,623,845	+				+0.3
2,623,849	+				-3.2
2,623,911	+				-1.6
2,623,919	-				+1.6
2,623,919	-				-3.2
2,624,000	-				+0.8
2,624,430	+				+1.4
2,624,430	+				-0.4
2,624,555	+				-0.4
2,624,555	+				+1.1
2,624,555	+				-0.8
2,624,563	-				+0.1
2,624,563	-				+0.6
2,624,563	-				+0.3
2,624,648	+				+1.1
2,624,731	-		Shew_2245	0.18	-0.5
2,624,775	+		Shew_2245	0.23	-3.2
2,625,024	+		Shew_2245	0.50	-1.7
2,625,024	+		Shew_2245	0.50	+1.0
2,625,024	+		Shew_2245	0.50	-1.5
2,625,032	-		Shew_2245	0.51	-0.8
2,625,032	-		Shew_2245	0.51	+1.9
2,625,032	-		Shew_2245	0.51	+0.1
2,625,032	-		Shew_2245	0.51	-0.1
2,625,192	+		Shew_2245	0.68	-2.7
2,625,888	-		Shew_2246	0.12	+0.9
2,625,949	-		Shew_2246	0.19	-3.0
2,626,420	+		Shew_2246	0.72	-0.0