Strain Fitness in Shewanella loihica PV-4 around Shew_2225

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
2,597,546	-				+1.5
2,597,653	+				+0.2
2,597,653	+				+0.2
2,597,663	+				-1.1
2,597,739	+				-1.5
2,597,994	+		Shew_2225	0.21	-2.6
2,597,994	+		Shew_2225	0.21	+0.3
2,597,994	+		Shew_2225	0.21	+1.5
2,598,002	-		Shew_2225	0.22	+1.1
2,598,002	-		Shew_2225	0.22	+0.4
2,598,002	-		Shew_2225	0.22	+1.3
2,598,002	-		Shew_2225	0.22	+0.6
2,598,052	-		Shew_2225	0.26	-2.2
2,598,130	-		Shew_2225	0.32	-0.4
2,598,312	+		Shew_2225	0.45	+1.0
2,598,351	+		Shew_2225	0.48	-0.4
2,598,502	+		Shew_2225	0.59	-2.7
2,598,985	+				+0.5
2,599,357	-				+1.1
2,599,362	+				+0.3
2,599,370	-				+0.1
2,599,370	-				-3.0
2,599,559	+				-0.3
2,599,582	+				-0.3
2,599,734	-				+0.7
2,599,795	+				+1.3
2,599,810	+				-0.9
2,599,916	-				-0.3