Strain Fitness in Shewanella loihica PV-4 around Shew_2159
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,504,288 | + | Shew_2158 | 0.62 | +0.0 | |
| 2,504,418 | + | Shew_2158 | 0.69 | -0.0 | |
| 2,504,451 | - | Shew_2158 | 0.71 | +0.5 | |
| 2,505,360 | - | Shew_2159 | 0.21 | +0.3 | |
| 2,505,666 | - | Shew_2159 | 0.41 | -0.4 | |
| 2,505,679 | + | Shew_2159 | 0.41 | +0.1 | |
| 2,506,376 | - | Shew_2159 | 0.86 | +1.1 | |
| 2,506,518 | + | -1.4 | |||
| 2,507,370 | + | Shew_2160 | 0.37 | +0.5 |
Or see this region's nucleotide sequence