Strain Fitness in Shewanella loihica PV-4 around Shew_2154
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,497,673 | - | -0.8 | |||
| 2,497,973 | - | Shew_2153 | 0.42 | +1.8 | |
| 2,498,952 | + | Shew_2154 | 0.26 | -0.4 | |
| 2,498,960 | - | Shew_2154 | 0.27 | -3.6 | |
| 2,498,960 | - | Shew_2154 | 0.27 | +0.6 | |
| 2,498,960 | - | Shew_2154 | 0.27 | +1.5 | |
| 2,499,669 | - | Shew_2154 | 0.88 | -0.4 | |
| 2,499,669 | - | Shew_2154 | 0.88 | -1.8 | |
| 2,499,807 | + | -0.5 | |||
| 2,500,606 | - | Shew_2155 | 0.67 | +0.1 | |
| 2,500,611 | - | Shew_2155 | 0.68 | -1.4 |
Or see this region's nucleotide sequence