Strain Fitness in Shewanella loihica PV-4 around Shew_1811

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
2,080,161	+		Shew_1810	0.37	-0.2
2,080,658	+		Shew_1810	0.85	-1.3
2,080,666	-		Shew_1810	0.86	-0.4
2,080,944	+				-0.9
2,080,952	+				-3.3
2,080,952	+				-1.4
2,080,960	-				-2.6
2,080,960	-				-0.1
2,081,192	+		Shew_1811	0.42	-3.0
2,081,192	+		Shew_1811	0.42	-2.2
2,081,192	+		Shew_1811	0.42	-0.2
2,081,200	-		Shew_1811	0.43	-2.0
2,081,200	-		Shew_1811	0.43	-2.0
2,081,200	-		Shew_1811	0.43	-1.3
2,081,200	-		Shew_1811	0.43	-1.8
2,081,293	+		Shew_1811	0.61	-2.4
2,081,438	+		Shew_1811	0.88	-1.4
2,081,438	+		Shew_1811	0.88	-1.5
2,081,438	+		Shew_1811	0.88	-1.2
2,081,499	-				-0.9
2,081,770	-				+0.4
2,081,813	+				-0.6
2,081,813	+				+0.1
2,081,821	+				+0.0
2,081,821	+				-2.0
2,081,821	-				+0.9
2,081,821	+				+0.9
2,081,939	-				+1.0