Strain Fitness in Shewanella loihica PV-4 around Shew_1282
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,481,640 | - | Shew_1281 | 0.69 | +0.9 | |
| 1,482,082 | + | +0.5 | |||
| 1,482,464 | - | -0.3 | |||
| 1,482,648 | + | Shew_1282 | 0.72 | +0.5 | |
| 1,482,817 | - | -1.3 | |||
| 1,483,173 | + | +0.6 | |||
| 1,483,376 | + | +0.6 | |||
| 1,483,453 | - | -0.3 | |||
| 1,483,503 | + | Shew_1284 | 0.20 | -0.1 | |
| 1,483,557 | + | Shew_1284 | 0.31 | +0.2 | |
| 1,483,574 | + | Shew_1284 | 0.34 | +1.7 |
Or see this region's nucleotide sequence