Strain Fitness in Shewanella loihica PV-4 around Shew_1242

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
1,440,580	+				+0.2
1,440,580	+				-0.3
1,440,588	-				+0.6
1,441,239	+				+0.3
1,441,286	+				+0.8
1,441,319	+		Shew_1242	0.13	+1.0
1,441,327	-		Shew_1242	0.15	+1.6
1,441,331	+		Shew_1242	0.16	+0.3
1,441,339	+		Shew_1242	0.17	+1.7
1,441,432	+		Shew_1242	0.37	+0.1
1,441,617	-		Shew_1242	0.76	+0.5
1,441,713	+				-0.1
1,441,917	-				+0.7
1,442,020	-		Shew_1243	0.19	-2.0
1,442,289	+		Shew_1243	0.44	+1.9
1,442,289	+		Shew_1243	0.44	+2.1
1,442,360	+		Shew_1243	0.50	+3.5
1,442,425	+		Shew_1243	0.56	-0.5
1,442,510	-		Shew_1243	0.64	+0.6
1,442,570	+		Shew_1243	0.70	+0.0
1,442,653	+		Shew_1243	0.77	+0.3