Strain Fitness in Shewanella loihica PV-4 around Shew_0927
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,056,476 | + | -2.9 | |||
| 1,057,219 | + | -0.6 | |||
| 1,057,227 | - | -0.1 | |||
| 1,057,331 | + | +0.2 | |||
| 1,057,496 | - | +0.4 | |||
| 1,057,505 | + | -0.6 | |||
| 1,057,529 | + | -1.4 | |||
| 1,057,708 | + | Shew_0927 | 0.19 | -0.0 | |
| 1,057,757 | + | Shew_0927 | 0.22 | +0.3 | |
| 1,057,757 | + | Shew_0927 | 0.22 | +1.5 | |
| 1,058,164 | + | Shew_0927 | 0.45 | +2.2 | |
| 1,058,164 | + | Shew_0927 | 0.45 | +0.8 | |
| 1,058,666 | - | Shew_0927 | 0.74 | -0.5 | |
| 1,058,949 | + | +0.2 |
Or see this region's nucleotide sequence