Strain Fitness in Shewanella loihica PV-4 around Shew_0924

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
1,053,073	+				+1.5
1,053,178	+				+0.4
1,053,274	+				+0.1
1,053,295	+				-1.0
1,053,333	+				-0.8
1,053,351	+				-0.0
1,053,373	+				+0.1
1,053,381	-				-1.1
1,053,415	+				+0.1
1,053,415	+				-1.4
1,053,417	-				+0.0
1,053,465	-				+2.7
1,053,509	+				+1.1
1,053,509	+				+0.4
1,053,509	+				+0.5
1,053,509	+				+0.1
1,053,511	+				+0.6
1,053,516	+				+2.0
1,053,516	+				-0.4
1,053,521	+				+0.2
1,053,526	+				+0.0
1,053,531	+				+0.5
1,053,531	+				+0.2
1,053,531	+				+1.1
1,053,539	-				-0.1
1,053,539	-				+0.8
1,053,539	-				-1.3
1,053,553	+				-0.1
1,053,604	+				-0.4
1,053,639	+				-1.8
1,053,645	+				-2.4
1,053,653	-				+0.4
1,053,668	-				-0.3
1,053,669	-				-0.2
1,053,715	-				+0.2
1,053,716	+				-0.4
1,053,716	+				+0.1
1,053,726	+				+0.0
1,053,726	+				+0.5
1,053,726	+				-3.8
1,053,734	-				-0.1
1,053,735	+				-3.6
1,053,735	+				-4.0
1,053,736	-				-1.1
1,053,743	-				+1.5
1,053,743	-				-0.2
1,053,750	-				+0.3
1,053,765	+				+0.1
1,053,765	+				-3.9
1,053,797	-		Shew_0925	0.12	-2.9
1,053,798	-		Shew_0925	0.12	+0.4
1,053,800	-		Shew_0925	0.12	-0.7
1,053,801	-		Shew_0925	0.12	-0.0
1,053,844	-		Shew_0925	0.15	+0.6
1,053,844	-		Shew_0925	0.15	-2.0
1,053,858	+		Shew_0925	0.16	-2.0
1,053,891	+		Shew_0925	0.19	+0.6
1,053,891	+		Shew_0925	0.19	-1.4
1,053,891	+		Shew_0925	0.19	+0.5
1,053,891	+		Shew_0925	0.19	-0.0
1,053,891	+		Shew_0925	0.19	-0.0
1,053,891	+		Shew_0925	0.19	+0.4
1,053,891	+		Shew_0925	0.19	+0.6
1,053,896	+		Shew_0925	0.19	-0.5
1,053,899	-		Shew_0925	0.19	+0.0
1,053,899	-		Shew_0925	0.19	+0.0
1,053,899	-		Shew_0925	0.19	+1.3
1,053,899	-		Shew_0925	0.19	+1.1
1,053,899	-		Shew_0925	0.19	+0.6
1,053,899	-		Shew_0925	0.19	-0.5
1,053,899	-		Shew_0925	0.19	+0.4
1,053,899	-		Shew_0925	0.19	+0.3
1,053,904	-		Shew_0925	0.19	+0.4
1,053,904	-		Shew_0925	0.19	-0.9
1,053,915	+		Shew_0925	0.20	+1.6
1,053,935	+		Shew_0925	0.22	-0.2