Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0806 and Shew_0807 are separated by 748 nucleotides Shew_0807 and Shew_0808 are separated by 305 nucleotides
Shew_0806: Shew_0806 - MltA-interacting MipA family protein (RefSeq), at 918,384 to 919,229
_0806
Shew_0807: Shew_0807 - peptidase S8 and S53, subtilisin, kexin, sedolisin (RefSeq), at 919,978 to 925,095
_0807
Shew_0808: Shew_0808 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 925,401 to 927,065
_0808
Position (kb) 919
920
921
922
923
924
925
926 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 918.985 kb on + strand, within Shew_0806 at 919.075 kb on + strand, within Shew_0806 at 919.083 kb on + strand, within Shew_0806 at 919.230 kb on - strand at 919.355 kb on - strand at 919.620 kb on + strand at 919.966 kb on + strand at 920.029 kb on + strand at 920.140 kb on - strand at 920.140 kb on - strand at 920.312 kb on + strand at 920.422 kb on - strand at 920.574 kb on + strand, within Shew_0807 at 920.585 kb on + strand, within Shew_0807 at 920.585 kb on + strand, within Shew_0807 at 920.585 kb on + strand, within Shew_0807 at 921.035 kb on + strand, within Shew_0807 at 921.038 kb on + strand, within Shew_0807 at 921.507 kb on + strand, within Shew_0807 at 921.537 kb on - strand, within Shew_0807 at 921.722 kb on + strand, within Shew_0807 at 921.753 kb on + strand, within Shew_0807 at 921.911 kb on + strand, within Shew_0807 at 921.911 kb on + strand, within Shew_0807 at 921.919 kb on - strand, within Shew_0807 at 922.274 kb on - strand, within Shew_0807 at 922.519 kb on - strand, within Shew_0807 at 922.666 kb on - strand, within Shew_0807 at 922.748 kb on - strand, within Shew_0807 at 923.037 kb on - strand, within Shew_0807 at 923.137 kb on + strand, within Shew_0807 at 923.145 kb on - strand, within Shew_0807 at 923.313 kb on + strand, within Shew_0807 at 923.375 kb on + strand, within Shew_0807 at 923.488 kb on + strand, within Shew_0807 at 923.661 kb on + strand, within Shew_0807 at 923.960 kb on - strand, within Shew_0807 at 923.960 kb on - strand, within Shew_0807 at 924.436 kb on + strand, within Shew_0807 at 924.466 kb on - strand, within Shew_0807 at 924.550 kb on - strand, within Shew_0807 at 924.601 kb on + strand at 924.601 kb on + strand at 924.893 kb on + strand at 924.981 kb on + strand at 925.094 kb on + strand at 925.102 kb on - strand at 925.102 kb on - strand at 925.541 kb on + strand at 925.565 kb on + strand at 925.573 kb on - strand, within Shew_0808 at 925.971 kb on - strand, within Shew_0808
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 1 mg/ml remove 918,985 + Shew_0806 0.71 -2.6 919,075 + Shew_0806 0.82 -1.0 919,083 + Shew_0806 0.83 +1.2 919,230 - +0.8 919,355 - +0.8 919,620 + +0.4 919,966 + -0.1 920,029 + -0.4 920,140 - -1.1 920,140 - -1.3 920,312 + +1.2 920,422 - -0.6 920,574 + Shew_0807 0.12 +0.6 920,585 + Shew_0807 0.12 +0.8 920,585 + Shew_0807 0.12 +1.5 920,585 + Shew_0807 0.12 +1.7 921,035 + Shew_0807 0.21 +1.5 921,038 + Shew_0807 0.21 +1.1 921,507 + Shew_0807 0.30 -0.4 921,537 - Shew_0807 0.30 +1.0 921,722 + Shew_0807 0.34 +1.3 921,753 + Shew_0807 0.35 +0.2 921,911 + Shew_0807 0.38 +0.3 921,911 + Shew_0807 0.38 +1.9 921,919 - Shew_0807 0.38 -1.2 922,274 - Shew_0807 0.45 +0.3 922,519 - Shew_0807 0.50 -0.6 922,666 - Shew_0807 0.53 +0.9 922,748 - Shew_0807 0.54 -0.6 923,037 - Shew_0807 0.60 +0.5 923,137 + Shew_0807 0.62 -0.6 923,145 - Shew_0807 0.62 +0.8 923,313 + Shew_0807 0.65 +1.1 923,375 + Shew_0807 0.66 -3.0 923,488 + Shew_0807 0.69 -0.6 923,661 + Shew_0807 0.72 +0.1 923,960 - Shew_0807 0.78 -0.4 923,960 - Shew_0807 0.78 -0.3 924,436 + Shew_0807 0.87 +0.3 924,466 - Shew_0807 0.88 -2.0 924,550 - Shew_0807 0.89 -0.6 924,601 + +0.3 924,601 + -0.0 924,893 + +0.1 924,981 + -0.5 925,094 + +1.6 925,102 - -0.4 925,102 - +0.8 925,541 + +0.2 925,565 + +0.2 925,573 - Shew_0808 0.10 -0.7 925,971 - Shew_0808 0.34 -0.8
Or see this region's nucleotide sequence