Strain Fitness in Shewanella loihica PV-4 around Shew_0698
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
790,696 | + | rihA | Shew_0697 | 0.66 | +1.1 |
791,009 | + | +0.1 | |||
791,043 | - | +0.0 | |||
791,081 | + | +2.8 | |||
791,564 | - | -2.6 | |||
791,685 | + | -0.9 | |||
791,685 | + | -1.1 | |||
791,712 | + | -2.2 | |||
791,740 | + | -2.5 | |||
791,748 | - | -1.9 | |||
791,969 | + | Shew_0698 | 0.22 | -0.9 | |
791,994 | - | Shew_0698 | 0.23 | -3.5 | |
792,246 | + | Shew_0698 | 0.42 | -0.9 | |
792,380 | + | Shew_0698 | 0.51 | -1.3 | |
792,411 | - | Shew_0698 | 0.54 | -0.3 | |
793,055 | - | -1.1 | |||
793,455 | + | Shew_0699 | 0.18 | +0.1 | |
793,504 | - | Shew_0699 | 0.21 | -1.3 | |
793,633 | + | Shew_0699 | 0.30 | +0.1 | |
793,984 | - | Shew_0699 | 0.54 | -1.2 |
Or see this region's nucleotide sequence