Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0696 and rihA are separated by 43 nucleotides rihA and Shew_0698 are separated by 628 nucleotides
Shew_0696: Shew_0696 - ribokinase (RefSeq), at 789,076 to 789,990
_0696
Shew_0697: rihA - ribonucleoside hydrolase 1 (RefSeq), at 790,034 to 791,041
rihA
Shew_0698: Shew_0698 - Na+/H+ antiporter NhaC (RefSeq), at 791,670 to 793,052
_0698
Position (kb) 790
791
792 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 789.059 kb on - strand at 789.059 kb on - strand at 789.072 kb on - strand at 789.164 kb on - strand at 789.251 kb on + strand, within Shew_0696 at 789.251 kb on + strand, within Shew_0696 at 789.274 kb on - strand, within Shew_0696 at 789.293 kb on + strand, within Shew_0696 at 789.301 kb on - strand, within Shew_0696 at 789.306 kb on - strand, within Shew_0696 at 789.321 kb on + strand, within Shew_0696 at 789.396 kb on + strand, within Shew_0696 at 789.600 kb on + strand, within Shew_0696 at 789.608 kb on - strand, within Shew_0696 at 789.771 kb on - strand, within Shew_0696 at 789.973 kb on + strand at 790.001 kb on + strand at 790.009 kb on - strand at 790.178 kb on - strand, within rihA at 790.196 kb on + strand, within rihA at 790.250 kb on + strand, within rihA at 790.346 kb on - strand, within rihA at 790.346 kb on - strand, within rihA at 790.382 kb on - strand, within rihA at 790.453 kb on + strand, within rihA at 790.603 kb on + strand, within rihA at 790.611 kb on - strand, within rihA at 790.696 kb on + strand, within rihA at 791.009 kb on + strand at 791.043 kb on - strand at 791.081 kb on + strand at 791.564 kb on - strand at 791.685 kb on + strand at 791.685 kb on + strand at 791.712 kb on + strand at 791.740 kb on + strand at 791.748 kb on - strand at 791.969 kb on + strand, within Shew_0698 at 791.994 kb on - strand, within Shew_0698
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 1 mg/ml remove 789,059 - -0.6 789,059 - +0.5 789,072 - +0.1 789,164 - -0.1 789,251 + Shew_0696 0.19 +0.6 789,251 + Shew_0696 0.19 +2.0 789,274 - Shew_0696 0.22 -0.4 789,293 + Shew_0696 0.24 +0.2 789,301 - Shew_0696 0.25 +0.4 789,306 - Shew_0696 0.25 +0.3 789,321 + Shew_0696 0.27 +0.4 789,396 + Shew_0696 0.35 -0.2 789,600 + Shew_0696 0.57 +0.5 789,608 - Shew_0696 0.58 +2.3 789,771 - Shew_0696 0.76 +0.9 789,973 + +0.7 790,001 + +0.2 790,009 - +0.2 790,178 - rihA Shew_0697 0.14 +0.3 790,196 + rihA Shew_0697 0.16 -1.6 790,250 + rihA Shew_0697 0.21 +0.8 790,346 - rihA Shew_0697 0.31 -1.1 790,346 - rihA Shew_0697 0.31 -1.3 790,382 - rihA Shew_0697 0.35 +0.1 790,453 + rihA Shew_0697 0.42 -0.2 790,603 + rihA Shew_0697 0.56 -0.6 790,611 - rihA Shew_0697 0.57 +0.2 790,696 + rihA Shew_0697 0.66 +1.1 791,009 + +0.1 791,043 - +0.0 791,081 + +2.8 791,564 - -2.6 791,685 + -0.9 791,685 + -1.1 791,712 + -2.2 791,740 + -2.5 791,748 - -1.9 791,969 + Shew_0698 0.22 -0.9 791,994 - Shew_0698 0.23 -3.5
Or see this region's nucleotide sequence