Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0670 and Shew_0671 are separated by 44 nucleotides Shew_0671 and Shew_0672 are separated by 232 nucleotides
Shew_0670: Shew_0670 - hypothetical protein (RefSeq), at 762,619 to 764,085
_0670
Shew_0671: Shew_0671 - phospholipase A(1) (RefSeq), at 764,130 to 765,056
_0671
Shew_0672: Shew_0672 - uroporphyrin-III C-methyltransferase (RefSeq), at 765,289 to 766,110
_0672
Position (kb) 764
765
766 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 763.140 kb on + strand, within Shew_0670 at 763.140 kb on + strand, within Shew_0670 at 763.148 kb on - strand, within Shew_0670 at 763.378 kb on + strand, within Shew_0670 at 763.396 kb on - strand, within Shew_0670 at 763.438 kb on + strand, within Shew_0670 at 763.633 kb on - strand, within Shew_0670 at 763.749 kb on + strand, within Shew_0670 at 763.850 kb on + strand, within Shew_0670 at 763.935 kb on + strand, within Shew_0670 at 764.027 kb on - strand at 764.470 kb on - strand, within Shew_0671 at 764.536 kb on + strand, within Shew_0671 at 764.667 kb on + strand, within Shew_0671 at 764.758 kb on - strand, within Shew_0671 at 764.908 kb on - strand, within Shew_0671 at 764.952 kb on - strand, within Shew_0671 at 765.464 kb on + strand, within Shew_0672 at 765.504 kb on - strand, within Shew_0672 at 765.581 kb on - strand, within Shew_0672 at 765.960 kb on + strand, within Shew_0672
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 1 mg/ml remove 763,140 + Shew_0670 0.36 +0.3 763,140 + Shew_0670 0.36 -0.0 763,148 - Shew_0670 0.36 -0.1 763,378 + Shew_0670 0.52 -1.3 763,396 - Shew_0670 0.53 -2.0 763,438 + Shew_0670 0.56 -1.5 763,633 - Shew_0670 0.69 +1.8 763,749 + Shew_0670 0.77 -1.8 763,850 + Shew_0670 0.84 -0.2 763,935 + Shew_0670 0.90 -3.3 764,027 - -0.7 764,470 - Shew_0671 0.37 -2.0 764,536 + Shew_0671 0.44 +0.2 764,667 + Shew_0671 0.58 -0.8 764,758 - Shew_0671 0.68 +0.2 764,908 - Shew_0671 0.84 -0.9 764,952 - Shew_0671 0.89 +0.3 765,464 + Shew_0672 0.21 -1.4 765,504 - Shew_0672 0.26 -2.9 765,581 - Shew_0672 0.36 -1.1 765,960 + Shew_0672 0.82 +0.4
Or see this region's nucleotide sequence