Strain Fitness in Shewanella loihica PV-4 around Shew_0402

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
449,252	+		Shew_0400	0.43	-0.4
449,313	-		Shew_0400	0.51	+0.1
449,363	-		Shew_0400	0.57	-0.0
449,418	-		Shew_0400	0.64	-0.2
449,418	-		Shew_0400	0.64	+0.1
449,642	+				-0.2
449,989	-		Shew_0401	0.67	+0.0
450,014	+		Shew_0401	0.73	+0.1
450,170	+				-1.0
450,321	-				-2.3
451,130	+		Shew_0402	0.37	-0.5
451,583	+		Shew_0402	0.54	-0.2
451,583	+		Shew_0402	0.54	-0.7
451,591	-		Shew_0402	0.54	-0.3
451,643	+		Shew_0402	0.56	-0.8
451,784	-		Shew_0402	0.61	-1.0
451,814	+		Shew_0402	0.62	+0.1
451,814	+		Shew_0402	0.62	-0.6
451,852	+		Shew_0402	0.64	-2.0
451,884	+		Shew_0402	0.65	+1.7
451,884	+		Shew_0402	0.65	-1.6
451,884	+		Shew_0402	0.65	-0.5
451,884	+		Shew_0402	0.65	-0.2
451,884	+		Shew_0402	0.65	-2.3
452,080	+		Shew_0402	0.72	-0.4
452,088	-		Shew_0402	0.73	-0.7
452,536	+		Shew_0402	0.89	-0.5
452,549	-		Shew_0402	0.90	-0.8
452,680	+				-0.4
452,747	-				-1.0
452,859	-				-1.8