Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0249 and Shew_0250 are separated by 10 nucleotides Shew_0250 and Shew_0251 are separated by 377 nucleotides
Shew_0249: Shew_0249 - GCN5-related N-acetyltransferase (RefSeq), at 268,052 to 268,594
_0249
Shew_0250: Shew_0250 - MerR family transcriptional regulator (RefSeq), at 268,605 to 269,783
_0250
Shew_0251: Shew_0251 - phage integrase family protein (RefSeq), at 270,161 to 270,757
_0251
Position (kb) 268
269
270 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 267.607 kb on - strand at 267.913 kb on + strand at 267.932 kb on - strand at 268.026 kb on + strand at 268.110 kb on - strand, within Shew_0249 at 268.171 kb on - strand, within Shew_0249 at 268.342 kb on - strand, within Shew_0249 at 268.507 kb on + strand, within Shew_0249 at 268.718 kb on - strand at 268.740 kb on + strand, within Shew_0250 at 268.751 kb on - strand, within Shew_0250 at 268.826 kb on + strand, within Shew_0250 at 268.996 kb on - strand, within Shew_0250 at 269.180 kb on + strand, within Shew_0250 at 269.334 kb on + strand, within Shew_0250 at 269.413 kb on - strand, within Shew_0250 at 269.423 kb on - strand, within Shew_0250 at 269.423 kb on - strand, within Shew_0250 at 269.600 kb on + strand, within Shew_0250 at 269.600 kb on + strand, within Shew_0250 at 269.608 kb on - strand, within Shew_0250 at 269.608 kb on - strand, within Shew_0250 at 269.619 kb on + strand, within Shew_0250 at 269.708 kb on + strand at 269.794 kb on + strand at 269.827 kb on - strand at 269.834 kb on + strand at 269.834 kb on + strand at 269.852 kb on - strand at 269.899 kb on - strand at 269.986 kb on + strand at 270.053 kb on + strand at 270.065 kb on - strand at 270.095 kb on + strand at 270.275 kb on + strand, within Shew_0251 at 270.283 kb on - strand, within Shew_0251 at 270.295 kb on - strand, within Shew_0251 at 270.332 kb on - strand, within Shew_0251 at 270.353 kb on + strand, within Shew_0251 at 270.446 kb on - strand, within Shew_0251 at 270.511 kb on - strand, within Shew_0251 at 270.620 kb on + strand, within Shew_0251 at 270.723 kb on - strand at 270.734 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 1 mg/ml remove 267,607 - -1.5 267,913 + +0.5 267,932 - -0.9 268,026 + +0.0 268,110 - Shew_0249 0.11 +0.1 268,171 - Shew_0249 0.22 +1.2 268,342 - Shew_0249 0.53 +0.5 268,507 + Shew_0249 0.84 +0.9 268,718 - +0.4 268,740 + Shew_0250 0.11 +0.2 268,751 - Shew_0250 0.12 -0.4 268,826 + Shew_0250 0.19 -0.9 268,996 - Shew_0250 0.33 -2.5 269,180 + Shew_0250 0.49 -1.0 269,334 + Shew_0250 0.62 -0.1 269,413 - Shew_0250 0.69 +0.6 269,423 - Shew_0250 0.69 +0.3 269,423 - Shew_0250 0.69 -0.1 269,600 + Shew_0250 0.84 -1.4 269,600 + Shew_0250 0.84 +0.3 269,608 - Shew_0250 0.85 -0.3 269,608 - Shew_0250 0.85 +0.1 269,619 + Shew_0250 0.86 -0.4 269,708 + -2.2 269,794 + +0.1 269,827 - +0.7 269,834 + +0.4 269,834 + -0.1 269,852 - +0.7 269,899 - -1.6 269,986 + -0.2 270,053 + +0.0 270,065 - +0.6 270,095 + +0.5 270,275 + Shew_0251 0.19 +1.2 270,283 - Shew_0251 0.20 -4.1 270,295 - Shew_0251 0.22 -2.4 270,332 - Shew_0251 0.29 -1.8 270,353 + Shew_0251 0.32 +0.6 270,446 - Shew_0251 0.48 -1.5 270,511 - Shew_0251 0.59 -0.1 270,620 + Shew_0251 0.77 -0.3 270,723 - +0.1 270,734 - -0.7
Or see this region's nucleotide sequence