Strain Fitness in Shewanella loihica PV-4 around Shew_0200

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
210,152	+		Shew_0198	0.72	+0.0
210,152	+		Shew_0198	0.72	+0.4
210,420	+				+0.8
210,449	+				-0.3
210,457	-				-1.8
210,719	+		Shew_0199	0.27	+1.4
210,749	-		Shew_0199	0.33	-2.2
210,777	+		Shew_0199	0.38	+1.3
211,249	-				+0.0
211,426	-		Shew_0200	0.12	+0.8
211,860	+		Shew_0200	0.28	-0.2
211,868	-		Shew_0200	0.29	+1.2
211,868	-		Shew_0200	0.29	-0.2
211,991	+		Shew_0200	0.33	+1.6
212,044	+		Shew_0200	0.35	+1.2
212,120	+		Shew_0200	0.38	+0.7
212,128	-		Shew_0200	0.39	+0.3
212,141	+		Shew_0200	0.39	+1.2
212,230	-		Shew_0200	0.42	-1.2
212,507	+		Shew_0200	0.53	+0.1
212,688	-		Shew_0200	0.60	+1.8
212,822	+		Shew_0200	0.65	-0.1
212,875	-		Shew_0200	0.67	+0.8
212,999	+		Shew_0200	0.72	-0.3
213,116	+		Shew_0200	0.76	-2.2
213,345	-		Shew_0200	0.85	-2.0
213,616	-				+0.4
213,671	-				+0.0
213,965	+				-0.5
213,965	+				-2.5
213,965	+				-0.0
213,973	-				+0.3
214,079	+		Shew_0201	0.19	+1.3
214,131	+		Shew_0201	0.23	-1.0
214,134	-		Shew_0201	0.23	-1.7
214,136	+		Shew_0201	0.23	+0.8
214,139	-		Shew_0201	0.24	+0.2
214,144	-		Shew_0201	0.24	+1.7
214,164	-		Shew_0201	0.26	+1.0
214,549	+		Shew_0201	0.59	+0.6
214,549	+		Shew_0201	0.59	-0.7
214,557	-		Shew_0201	0.60	-0.4
214,557	-		Shew_0201	0.60	-0.1
214,557	-		Shew_0201	0.60	-0.2
214,557	-		Shew_0201	0.60	+0.3
214,557	-		Shew_0201	0.60	-0.9
214,557	-		Shew_0201	0.60	-0.8
214,741	-		Shew_0201	0.76	+0.8