Strain Fitness in Shewanella loihica PV-4 around Shew_0097

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
107,351	-		Shew_0095	0.47	-0.0
107,351	+		Shew_0095	0.47	+0.3
107,429	+		Shew_0095	0.69	+0.1
107,429	+		Shew_0095	0.69	+0.4
107,429	+		Shew_0095	0.69	+1.2
107,437	-		Shew_0095	0.71	+0.8
107,437	-		Shew_0095	0.71	-1.6
107,437	-		Shew_0095	0.71	+0.1
107,437	-		Shew_0095	0.71	+0.3
107,437	-		Shew_0095	0.71	+0.3
107,513	+				+0.4
107,731	-				-1.7
107,775	-		Shew_0096	0.15	-1.5
107,789	+		Shew_0096	0.18	+0.4
107,797	-		Shew_0096	0.20	-1.8
107,797	-		Shew_0096	0.20	-0.6
107,811	-		Shew_0096	0.22	-1.5
107,818	-		Shew_0096	0.23	-1.2
107,837	+		Shew_0096	0.27	-3.7
108,186	-				-2.5
108,213	+				+0.8
108,339	-		Shew_0097	0.16	-1.4
108,345	-		Shew_0097	0.17	-2.0
108,469	+		Shew_0097	0.35	-3.0
108,553	-		Shew_0097	0.47	-2.4
108,927	-				-1.9
109,074	+				-0.3
109,442	-		Shew_0098	0.38	-2.2
109,581	-		Shew_0098	0.49	-2.3
109,642	-		Shew_0098	0.54	-1.2
109,661	+		Shew_0098	0.56	-0.4
109,868	+		Shew_0098	0.72	-3.3
109,869	+		Shew_0098	0.72	-2.8
109,877	-		Shew_0098	0.73	-3.0
109,877	-		Shew_0098	0.73	+1.4
109,893	-		Shew_0098	0.74	-4.2