Strain Fitness in Shewanella loihica PV-4 around Shew_0079

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
90,921	+		Shew_0078	0.15	+0.0
90,927	+		Shew_0078	0.16	+0.0
90,932	+		Shew_0078	0.17	-1.2
90,940	-		Shew_0078	0.18	+1.4
90,940	-		Shew_0078	0.18	+0.2
90,944	+		Shew_0078	0.18	-0.0
90,962	-		Shew_0078	0.20	-0.4
91,033	+		Shew_0078	0.28	-0.2
91,216	-		Shew_0078	0.50	-0.3
91,226	-		Shew_0078	0.51	+0.1
91,461	-		Shew_0078	0.78	-0.3
91,572	-				-0.9
91,825	+				+0.5
91,831	+				+0.0
91,833	-				+0.3
91,901	-				+1.3
91,989	+				-0.7
91,997	-				+0.5
92,016	-		Shew_0079	0.11	+0.5
92,152	+		Shew_0079	0.21	+0.1
92,248	-		Shew_0079	0.27	-0.7
92,248	-		Shew_0079	0.27	+0.3
92,351	+		Shew_0079	0.34	-0.0
92,573	-		Shew_0079	0.49	+0.7
92,632	+		Shew_0079	0.53	+0.3
92,816	-		Shew_0079	0.66	+0.2
92,816	-		Shew_0079	0.66	+1.1
92,870	+		Shew_0079	0.70	+0.4
92,944	-		Shew_0079	0.75	+0.1
92,950	+		Shew_0079	0.75	+0.8
92,960	+		Shew_0079	0.76	-0.8
92,968	-		Shew_0079	0.76	+1.2
92,968	-		Shew_0079	0.76	+0.3
93,149	-		Shew_0079	0.89	+0.3
93,373	+				+0.2
93,477	+				+0.8
93,510	-				-0.9
93,537	+				+0.3
93,545	-				+1.0
93,545	-				-0.2
93,555	-				-1.0
93,555	-				+0.6
93,589	-				-0.1
93,589	-				-0.9
93,597	+				-0.1
93,641	-				+0.3
93,681	+				+0.1
93,681	+				-0.3
93,681	+				+0.8
93,681	+				+0.4
93,681	+				-1.6
93,681	+				+2.5
93,689	-				+0.2
93,689	-				-0.6
93,689	-				+0.5
93,825	+		Shew_0080	0.19	+0.9
93,955	-		Shew_0080	0.29	-1.2
94,003	-		Shew_0080	0.33	-0.5
94,014	-		Shew_0080	0.34	-0.1
94,054	+		Shew_0080	0.37	+0.0
94,145	-		Shew_0080	0.44	-1.6
94,160	+		Shew_0080	0.45	+1.0
94,168	-		Shew_0080	0.46	-1.2
94,283	-		Shew_0080	0.55	-0.6