Strain Fitness in Shewanella loihica PV-4 around Shew_0029

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
30,324	-		Shew_0028	0.24	+0.1
30,531	+		Shew_0028	0.47	+0.1
30,539	-		Shew_0028	0.48	-0.2
30,559	-		Shew_0028	0.50	+0.0
30,572	-		Shew_0028	0.51	-0.2
30,688	-		Shew_0028	0.64	-1.0
30,780	+		Shew_0028	0.74	+0.0
30,790	+		Shew_0028	0.76	-1.3
30,951	-				+0.0
31,272	-				-0.1
31,658	+		Shew_0029	0.61	-1.4
31,658	+		Shew_0029	0.61	-1.1
31,658	+		Shew_0029	0.61	-0.9
31,658	+		Shew_0029	0.61	-1.0
31,666	-		Shew_0029	0.62	+0.2
31,893	+				-0.4
31,908	-				-0.6
31,936	-				-0.2
32,142	-				+0.2
32,285	+		Shew_0030	0.28	-0.3
32,293	-		Shew_0030	0.29	+0.1
32,293	-		Shew_0030	0.29	+0.1
32,336	-		Shew_0030	0.34	+0.0
32,585	+		Shew_0030	0.67	-0.1
32,604	+		Shew_0030	0.70	-0.3
32,815	-				+0.8
32,815	-				+0.2
32,862	-				+0.5