Strain Fitness in Shewanella loihica PV-4 around Shew_0018

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
19,024	+				+0.7
19,075	+		Shew_0017	0.13	+1.2
19,170	+		Shew_0017	0.33	+0.5
19,334	+		Shew_0017	0.66	+0.3
19,339	+		Shew_0017	0.67	+1.5
19,346	+		Shew_0017	0.69	-0.7
19,347	-		Shew_0017	0.69	+0.1
19,426	+		Shew_0017	0.85	+1.3
19,771	-				-2.7
19,871	-				-0.3
19,900	-				-0.3
19,960	-				-1.7
19,961	+				+0.2
19,965	-				+0.4
20,088	+	fadA	Shew_0018	0.20	-1.2
20,162	+	fadA	Shew_0018	0.26	-1.0
20,297	+	fadA	Shew_0018	0.38	+0.1
20,660	-	fadA	Shew_0018	0.69	-0.3
20,836	-	fadA	Shew_0018	0.84	+0.2
20,916	-				+1.2
20,981	-				+0.3
21,160	-				-0.1
21,160	-				+1.7
21,192	-				+0.3
21,216	-				+0.9
21,369	+	fadB	Shew_0019	0.15	+0.3
21,417	-	fadB	Shew_0019	0.18	+0.2
21,457	+	fadB	Shew_0019	0.19	+0.7
21,544	+	fadB	Shew_0019	0.23	+1.3
21,557	-	fadB	Shew_0019	0.24	+0.8
21,784	-	fadB	Shew_0019	0.35	+0.4
21,855	-	fadB	Shew_0019	0.38	-0.6
21,870	-	fadB	Shew_0019	0.39	+0.2
21,882	-	fadB	Shew_0019	0.39	-0.2