Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5145 and Pf6N2E2_5146 are separated by 258 nucleotides Pf6N2E2_5146 and Pf6N2E2_5147 are separated by 0 nucleotides Pf6N2E2_5147 and Pf6N2E2_5148 are separated by 120 nucleotides
Pf6N2E2_5145 - Mobile element protein, at 5,928,758 to 5,929,705
_5145
Pf6N2E2_5146 - FIG00953066: hypothetical protein, at 5,929,964 to 5,930,260
_5146
Pf6N2E2_5147 - putative exported protein, at 5,930,261 to 5,933,194
_5147
Pf6N2E2_5148 - Methyltransferase (EC 2.1.1.-), at 5,933,315 to 5,934,331
_5148
Position (kb) 5930
5931
5932
5933
5934 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5929.901 kb on + strand at 5929.901 kb on + strand at 5929.901 kb on + strand at 5929.906 kb on + strand at 5929.906 kb on + strand at 5929.906 kb on + strand at 5929.906 kb on + strand at 5929.906 kb on + strand at 5929.906 kb on + strand at 5929.936 kb on + strand at 5929.936 kb on + strand at 5929.936 kb on + strand at 5929.937 kb on - strand at 5929.937 kb on - strand at 5929.937 kb on - strand at 5929.937 kb on - strand at 5930.019 kb on + strand, within Pf6N2E2_5146 at 5930.019 kb on + strand, within Pf6N2E2_5146 at 5930.020 kb on - strand, within Pf6N2E2_5146 at 5930.025 kb on + strand, within Pf6N2E2_5146 at 5930.025 kb on + strand, within Pf6N2E2_5146 at 5930.025 kb on + strand, within Pf6N2E2_5146 at 5930.025 kb on + strand, within Pf6N2E2_5146 at 5930.025 kb on + strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.026 kb on - strand, within Pf6N2E2_5146 at 5930.046 kb on + strand, within Pf6N2E2_5146 at 5930.047 kb on - strand, within Pf6N2E2_5146 at 5930.098 kb on - strand, within Pf6N2E2_5146 at 5930.098 kb on - strand, within Pf6N2E2_5146 at 5930.262 kb on + strand at 5930.263 kb on - strand at 5930.263 kb on - strand at 5930.337 kb on + strand at 5930.338 kb on - strand at 5930.338 kb on - strand at 5930.338 kb on - strand at 5930.390 kb on - strand at 5930.485 kb on + strand at 5930.535 kb on + strand at 5930.536 kb on - strand at 5930.536 kb on - strand at 5930.536 kb on - strand at 5930.580 kb on - strand, within Pf6N2E2_5147 at 5930.580 kb on - strand, within Pf6N2E2_5147 at 5930.580 kb on - strand, within Pf6N2E2_5147 at 5930.632 kb on - strand, within Pf6N2E2_5147 at 5930.632 kb on - strand, within Pf6N2E2_5147 at 5930.632 kb on - strand, within Pf6N2E2_5147 at 5930.632 kb on - strand, within Pf6N2E2_5147 at 5930.632 kb on - strand, within Pf6N2E2_5147 at 5930.632 kb on - strand, within Pf6N2E2_5147 at 5930.634 kb on + strand, within Pf6N2E2_5147 at 5930.634 kb on + strand, within Pf6N2E2_5147 at 5930.634 kb on + strand, within Pf6N2E2_5147 at 5930.634 kb on + strand, within Pf6N2E2_5147 at 5930.634 kb on + strand, within Pf6N2E2_5147 at 5930.635 kb on - strand, within Pf6N2E2_5147 at 5930.635 kb on - strand, within Pf6N2E2_5147 at 5930.640 kb on + strand, within Pf6N2E2_5147 at 5930.640 kb on + strand, within Pf6N2E2_5147 at 5930.640 kb on + strand, within Pf6N2E2_5147 at 5930.640 kb on + strand, within Pf6N2E2_5147 at 5930.640 kb on + strand, within Pf6N2E2_5147 at 5930.641 kb on - strand, within Pf6N2E2_5147 at 5930.646 kb on + strand, within Pf6N2E2_5147 at 5930.646 kb on + strand, within Pf6N2E2_5147 at 5930.776 kb on + strand, within Pf6N2E2_5147 at 5930.776 kb on + strand, within Pf6N2E2_5147 at 5930.861 kb on - strand, within Pf6N2E2_5147 at 5930.888 kb on + strand, within Pf6N2E2_5147 at 5930.888 kb on + strand, within Pf6N2E2_5147 at 5930.966 kb on + strand, within Pf6N2E2_5147 at 5930.967 kb on - strand, within Pf6N2E2_5147 at 5931.633 kb on + strand, within Pf6N2E2_5147 at 5931.633 kb on + strand, within Pf6N2E2_5147 at 5931.633 kb on + strand, within Pf6N2E2_5147 at 5931.634 kb on - strand, within Pf6N2E2_5147 at 5931.801 kb on - strand, within Pf6N2E2_5147 at 5931.801 kb on - strand, within Pf6N2E2_5147 at 5931.828 kb on + strand, within Pf6N2E2_5147 at 5931.828 kb on + strand, within Pf6N2E2_5147 at 5931.828 kb on + strand, within Pf6N2E2_5147 at 5931.828 kb on + strand, within Pf6N2E2_5147 at 5931.828 kb on + strand, within Pf6N2E2_5147 at 5931.828 kb on + strand, within Pf6N2E2_5147 at 5931.828 kb on + strand, within Pf6N2E2_5147 at 5931.829 kb on - strand, within Pf6N2E2_5147 at 5931.829 kb on - strand, within Pf6N2E2_5147 at 5931.829 kb on - strand, within Pf6N2E2_5147 at 5931.959 kb on - strand, within Pf6N2E2_5147 at 5931.984 kb on + strand, within Pf6N2E2_5147 at 5931.984 kb on + strand, within Pf6N2E2_5147 at 5931.984 kb on + strand, within Pf6N2E2_5147 at 5931.984 kb on + strand, within Pf6N2E2_5147 at 5931.984 kb on + strand, within Pf6N2E2_5147 at 5931.985 kb on - strand, within Pf6N2E2_5147 at 5931.985 kb on - strand, within Pf6N2E2_5147 at 5931.985 kb on - strand, within Pf6N2E2_5147 at 5931.985 kb on - strand, within Pf6N2E2_5147 at 5931.985 kb on - strand, within Pf6N2E2_5147 at 5931.985 kb on - strand, within Pf6N2E2_5147 at 5932.063 kb on + strand, within Pf6N2E2_5147 at 5932.063 kb on + strand, within Pf6N2E2_5147 at 5932.063 kb on + strand, within Pf6N2E2_5147 at 5932.063 kb on + strand, within Pf6N2E2_5147 at 5932.063 kb on + strand, within Pf6N2E2_5147 at 5932.063 kb on + strand, within Pf6N2E2_5147 at 5932.063 kb on + strand, within Pf6N2E2_5147 at 5932.063 kb on + strand, within Pf6N2E2_5147 at 5932.063 kb on + strand, within Pf6N2E2_5147 at 5932.063 kb on + strand, within Pf6N2E2_5147 at 5932.064 kb on - strand, within Pf6N2E2_5147 at 5932.064 kb on - strand, within Pf6N2E2_5147 at 5932.064 kb on - strand, within Pf6N2E2_5147 at 5932.064 kb on - strand, within Pf6N2E2_5147 at 5932.064 kb on - strand, within Pf6N2E2_5147 at 5932.064 kb on - strand, within Pf6N2E2_5147 at 5932.064 kb on - strand, within Pf6N2E2_5147 at 5932.065 kb on + strand, within Pf6N2E2_5147 at 5932.065 kb on + strand, within Pf6N2E2_5147 at 5932.065 kb on + strand, within Pf6N2E2_5147 at 5932.065 kb on + strand, within Pf6N2E2_5147 at 5932.066 kb on - strand, within Pf6N2E2_5147 at 5932.066 kb on - strand, within Pf6N2E2_5147 at 5932.066 kb on - strand, within Pf6N2E2_5147 at 5932.066 kb on - strand, within Pf6N2E2_5147 at 5932.066 kb on - strand, within Pf6N2E2_5147 at 5932.066 kb on - strand, within Pf6N2E2_5147 at 5932.066 kb on - strand, within Pf6N2E2_5147 at 5932.285 kb on + strand, within Pf6N2E2_5147 at 5932.443 kb on + strand, within Pf6N2E2_5147 at 5932.444 kb on - strand, within Pf6N2E2_5147 at 5932.503 kb on + strand, within Pf6N2E2_5147 at 5932.503 kb on + strand, within Pf6N2E2_5147 at 5932.503 kb on + strand, within Pf6N2E2_5147 at 5932.504 kb on - strand, within Pf6N2E2_5147 at 5932.504 kb on - strand, within Pf6N2E2_5147 at 5932.504 kb on - strand, within Pf6N2E2_5147 at 5932.737 kb on + strand, within Pf6N2E2_5147 at 5932.737 kb on + strand, within Pf6N2E2_5147 at 5932.737 kb on + strand, within Pf6N2E2_5147 at 5932.738 kb on - strand, within Pf6N2E2_5147 at 5932.738 kb on - strand, within Pf6N2E2_5147 at 5932.738 kb on - strand, within Pf6N2E2_5147 at 5932.738 kb on - strand, within Pf6N2E2_5147 at 5932.738 kb on - strand, within Pf6N2E2_5147 at 5932.950 kb on + strand at 5932.950 kb on + strand at 5932.950 kb on + strand at 5932.951 kb on - strand at 5932.951 kb on - strand at 5933.139 kb on + strand at 5933.235 kb on + strand at 5933.235 kb on + strand at 5933.236 kb on - strand at 5933.236 kb on - strand at 5933.236 kb on - strand at 5933.236 kb on - strand at 5933.248 kb on + strand at 5933.249 kb on - strand at 5933.272 kb on + strand at 5933.316 kb on + strand at 5933.316 kb on + strand at 5933.435 kb on + strand, within Pf6N2E2_5148 at 5933.435 kb on + strand, within Pf6N2E2_5148 at 5933.436 kb on - strand, within Pf6N2E2_5148 at 5933.436 kb on - strand, within Pf6N2E2_5148 at 5933.541 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.637 kb on + strand, within Pf6N2E2_5148 at 5933.638 kb on - strand, within Pf6N2E2_5148 at 5933.638 kb on - strand, within Pf6N2E2_5148 at 5933.638 kb on - strand, within Pf6N2E2_5148 at 5933.638 kb on - strand, within Pf6N2E2_5148 at 5933.706 kb on + strand, within Pf6N2E2_5148 at 5933.853 kb on + strand, within Pf6N2E2_5148 at 5934.027 kb on + strand, within Pf6N2E2_5148 at 5934.078 kb on + strand, within Pf6N2E2_5148 at 5934.079 kb on - strand, within Pf6N2E2_5148
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 5,929,901 + -1.1 5,929,901 + +1.3 5,929,901 + +1.1 5,929,906 + -0.6 5,929,906 + -0.1 5,929,906 + -0.1 5,929,906 + -1.0 5,929,906 + +0.5 5,929,906 + -0.2 5,929,936 + -1.1 5,929,936 + -0.6 5,929,936 + +0.3 5,929,937 - -1.0 5,929,937 - -2.1 5,929,937 - -0.7 5,929,937 - +0.6 5,930,019 + Pf6N2E2_5146 0.19 +0.5 5,930,019 + Pf6N2E2_5146 0.19 -0.2 5,930,020 - Pf6N2E2_5146 0.19 +0.1 5,930,025 + Pf6N2E2_5146 0.21 -0.4 5,930,025 + Pf6N2E2_5146 0.21 +1.0 5,930,025 + Pf6N2E2_5146 0.21 +0.6 5,930,025 + Pf6N2E2_5146 0.21 +0.4 5,930,025 + Pf6N2E2_5146 0.21 +0.1 5,930,026 - Pf6N2E2_5146 0.21 -1.1 5,930,026 - Pf6N2E2_5146 0.21 -0.1 5,930,026 - Pf6N2E2_5146 0.21 +0.2 5,930,026 - Pf6N2E2_5146 0.21 -0.8 5,930,026 - Pf6N2E2_5146 0.21 +0.8 5,930,026 - Pf6N2E2_5146 0.21 +0.4 5,930,026 - Pf6N2E2_5146 0.21 +0.7 5,930,026 - Pf6N2E2_5146 0.21 +0.3 5,930,026 - Pf6N2E2_5146 0.21 +0.6 5,930,026 - Pf6N2E2_5146 0.21 +0.4 5,930,026 - Pf6N2E2_5146 0.21 +0.6 5,930,026 - Pf6N2E2_5146 0.21 +0.2 5,930,046 + Pf6N2E2_5146 0.28 -0.3 5,930,047 - Pf6N2E2_5146 0.28 -0.3 5,930,098 - Pf6N2E2_5146 0.45 -0.2 5,930,098 - Pf6N2E2_5146 0.45 -0.6 5,930,262 + -2.0 5,930,263 - +0.0 5,930,263 - -0.1 5,930,337 + -1.0 5,930,338 - +0.9 5,930,338 - -0.5 5,930,338 - +0.1 5,930,390 - +0.6 5,930,485 + +0.4 5,930,535 + -0.0 5,930,536 - +0.5 5,930,536 - -1.4 5,930,536 - -0.2 5,930,580 - Pf6N2E2_5147 0.11 +0.4 5,930,580 - Pf6N2E2_5147 0.11 -0.4 5,930,580 - Pf6N2E2_5147 0.11 -1.6 5,930,632 - Pf6N2E2_5147 0.13 -0.1 5,930,632 - Pf6N2E2_5147 0.13 -0.5 5,930,632 - Pf6N2E2_5147 0.13 -1.0 5,930,632 - Pf6N2E2_5147 0.13 -0.1 5,930,632 - Pf6N2E2_5147 0.13 +0.5 5,930,632 - Pf6N2E2_5147 0.13 -0.4 5,930,634 + Pf6N2E2_5147 0.13 -1.4 5,930,634 + Pf6N2E2_5147 0.13 -2.1 5,930,634 + Pf6N2E2_5147 0.13 +1.4 5,930,634 + Pf6N2E2_5147 0.13 -0.9 5,930,634 + Pf6N2E2_5147 0.13 +0.1 5,930,635 - Pf6N2E2_5147 0.13 -1.0 5,930,635 - Pf6N2E2_5147 0.13 -1.8 5,930,640 + Pf6N2E2_5147 0.13 -1.3 5,930,640 + Pf6N2E2_5147 0.13 -1.0 5,930,640 + Pf6N2E2_5147 0.13 +1.0 5,930,640 + Pf6N2E2_5147 0.13 -0.3 5,930,640 + Pf6N2E2_5147 0.13 -1.9 5,930,641 - Pf6N2E2_5147 0.13 +0.6 5,930,646 + Pf6N2E2_5147 0.13 +0.5 5,930,646 + Pf6N2E2_5147 0.13 -0.4 5,930,776 + Pf6N2E2_5147 0.18 -1.6 5,930,776 + Pf6N2E2_5147 0.18 -0.9 5,930,861 - Pf6N2E2_5147 0.20 -0.1 5,930,888 + Pf6N2E2_5147 0.21 +0.9 5,930,888 + Pf6N2E2_5147 0.21 +0.3 5,930,966 + Pf6N2E2_5147 0.24 -0.3 5,930,967 - Pf6N2E2_5147 0.24 -2.6 5,931,633 + Pf6N2E2_5147 0.47 -0.6 5,931,633 + Pf6N2E2_5147 0.47 -1.1 5,931,633 + Pf6N2E2_5147 0.47 -0.2 5,931,634 - Pf6N2E2_5147 0.47 -0.3 5,931,801 - Pf6N2E2_5147 0.52 +1.6 5,931,801 - Pf6N2E2_5147 0.52 -2.6 5,931,828 + Pf6N2E2_5147 0.53 +0.1 5,931,828 + Pf6N2E2_5147 0.53 -0.3 5,931,828 + Pf6N2E2_5147 0.53 -0.6 5,931,828 + Pf6N2E2_5147 0.53 +0.3 5,931,828 + Pf6N2E2_5147 0.53 -0.9 5,931,828 + Pf6N2E2_5147 0.53 -0.5 5,931,828 + Pf6N2E2_5147 0.53 -0.7 5,931,829 - Pf6N2E2_5147 0.53 -0.4 5,931,829 - Pf6N2E2_5147 0.53 +0.6 5,931,829 - Pf6N2E2_5147 0.53 -0.2 5,931,959 - Pf6N2E2_5147 0.58 -0.1 5,931,984 + Pf6N2E2_5147 0.59 -1.9 5,931,984 + Pf6N2E2_5147 0.59 -0.0 5,931,984 + Pf6N2E2_5147 0.59 +0.4 5,931,984 + Pf6N2E2_5147 0.59 -0.9 5,931,984 + Pf6N2E2_5147 0.59 +1.5 5,931,985 - Pf6N2E2_5147 0.59 -1.1 5,931,985 - Pf6N2E2_5147 0.59 +0.2 5,931,985 - Pf6N2E2_5147 0.59 +0.8 5,931,985 - Pf6N2E2_5147 0.59 -0.9 5,931,985 - Pf6N2E2_5147 0.59 +0.5 5,931,985 - Pf6N2E2_5147 0.59 +1.6 5,932,063 + Pf6N2E2_5147 0.61 +0.1 5,932,063 + Pf6N2E2_5147 0.61 +1.3 5,932,063 + Pf6N2E2_5147 0.61 +1.1 5,932,063 + Pf6N2E2_5147 0.61 -0.8 5,932,063 + Pf6N2E2_5147 0.61 +0.8 5,932,063 + Pf6N2E2_5147 0.61 -0.5 5,932,063 + Pf6N2E2_5147 0.61 -0.8 5,932,063 + Pf6N2E2_5147 0.61 +0.1 5,932,063 + Pf6N2E2_5147 0.61 -0.1 5,932,063 + Pf6N2E2_5147 0.61 -1.7 5,932,064 - Pf6N2E2_5147 0.61 +1.2 5,932,064 - Pf6N2E2_5147 0.61 -1.2 5,932,064 - Pf6N2E2_5147 0.61 -1.2 5,932,064 - Pf6N2E2_5147 0.61 -1.2 5,932,064 - Pf6N2E2_5147 0.61 -0.6 5,932,064 - Pf6N2E2_5147 0.61 -0.5 5,932,064 - Pf6N2E2_5147 0.61 -0.2 5,932,065 + Pf6N2E2_5147 0.61 +0.2 5,932,065 + Pf6N2E2_5147 0.61 +0.6 5,932,065 + Pf6N2E2_5147 0.61 -0.1 5,932,065 + Pf6N2E2_5147 0.61 -0.6 5,932,066 - Pf6N2E2_5147 0.62 -0.5 5,932,066 - Pf6N2E2_5147 0.62 +0.1 5,932,066 - Pf6N2E2_5147 0.62 -0.7 5,932,066 - Pf6N2E2_5147 0.62 +0.6 5,932,066 - Pf6N2E2_5147 0.62 +0.6 5,932,066 - Pf6N2E2_5147 0.62 -1.0 5,932,066 - Pf6N2E2_5147 0.62 +0.8 5,932,285 + Pf6N2E2_5147 0.69 -0.9 5,932,443 + Pf6N2E2_5147 0.74 +0.7 5,932,444 - Pf6N2E2_5147 0.74 -0.3 5,932,503 + Pf6N2E2_5147 0.76 -0.5 5,932,503 + Pf6N2E2_5147 0.76 -1.0 5,932,503 + Pf6N2E2_5147 0.76 -0.6 5,932,504 - Pf6N2E2_5147 0.76 -0.1 5,932,504 - Pf6N2E2_5147 0.76 -2.1 5,932,504 - Pf6N2E2_5147 0.76 -0.8 5,932,737 + Pf6N2E2_5147 0.84 -0.4 5,932,737 + Pf6N2E2_5147 0.84 -1.3 5,932,737 + Pf6N2E2_5147 0.84 -0.5 5,932,738 - Pf6N2E2_5147 0.84 -0.3 5,932,738 - Pf6N2E2_5147 0.84 +0.8 5,932,738 - Pf6N2E2_5147 0.84 -0.4 5,932,738 - Pf6N2E2_5147 0.84 -0.3 5,932,738 - Pf6N2E2_5147 0.84 -0.1 5,932,950 + -0.0 5,932,950 + +0.1 5,932,950 + -2.3 5,932,951 - -0.4 5,932,951 - +0.9 5,933,139 + -1.4 5,933,235 + -0.9 5,933,235 + +1.1 5,933,236 - -0.6 5,933,236 - +1.2 5,933,236 - +0.6 5,933,236 - -0.4 5,933,248 + +0.7 5,933,249 - +0.2 5,933,272 + -0.6 5,933,316 + +0.1 5,933,316 + +0.4 5,933,435 + Pf6N2E2_5148 0.12 +2.0 5,933,435 + Pf6N2E2_5148 0.12 -0.8 5,933,436 - Pf6N2E2_5148 0.12 -0.1 5,933,436 - Pf6N2E2_5148 0.12 +0.3 5,933,541 + Pf6N2E2_5148 0.22 -0.5 5,933,637 + Pf6N2E2_5148 0.32 +1.1 5,933,637 + Pf6N2E2_5148 0.32 +0.3 5,933,637 + Pf6N2E2_5148 0.32 +0.7 5,933,637 + Pf6N2E2_5148 0.32 -1.5 5,933,637 + Pf6N2E2_5148 0.32 +0.2 5,933,637 + Pf6N2E2_5148 0.32 +0.3 5,933,637 + Pf6N2E2_5148 0.32 +0.4 5,933,637 + Pf6N2E2_5148 0.32 -0.9 5,933,637 + Pf6N2E2_5148 0.32 -0.3 5,933,637 + Pf6N2E2_5148 0.32 +0.7 5,933,637 + Pf6N2E2_5148 0.32 +0.3 5,933,637 + Pf6N2E2_5148 0.32 +1.0 5,933,638 - Pf6N2E2_5148 0.32 +0.1 5,933,638 - Pf6N2E2_5148 0.32 +1.2 5,933,638 - Pf6N2E2_5148 0.32 +0.7 5,933,638 - Pf6N2E2_5148 0.32 -0.1 5,933,706 + Pf6N2E2_5148 0.38 -0.8 5,933,853 + Pf6N2E2_5148 0.53 -0.0 5,934,027 + Pf6N2E2_5148 0.70 +0.1 5,934,078 + Pf6N2E2_5148 0.75 +0.4 5,934,079 - Pf6N2E2_5148 0.75 -1.0
Or see this region's nucleotide sequence