Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4780

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
5,521,343	+		Pf6N2E2_4778	0.87	+0.2
5,521,344	-		Pf6N2E2_4778	0.87	-0.3
5,521,379	+		Pf6N2E2_4778	0.89	-0.5
5,521,447	+				+1.1
5,521,608	-				-0.2
5,521,609	+				-0.5
5,521,609	+				-1.0
5,521,609	+				-1.2
5,521,610	-				+1.0
5,521,610	-				-0.8
5,521,630	+				+0.6
5,521,630	+				-0.7
5,521,653	-				-0.1
5,521,653	-				+1.0
5,521,663	-				+0.2
5,521,967	+		Pf6N2E2_4779	0.29	+0.2
5,521,968	-		Pf6N2E2_4779	0.30	+0.3
5,522,002	+		Pf6N2E2_4779	0.37	+1.2
5,522,002	+		Pf6N2E2_4779	0.37	+0.2
5,522,002	+		Pf6N2E2_4779	0.37	+0.3
5,522,072	+		Pf6N2E2_4779	0.52	-0.2
5,522,072	+		Pf6N2E2_4779	0.52	-0.2
5,522,072	+		Pf6N2E2_4779	0.52	-0.1
5,522,073	-		Pf6N2E2_4779	0.52	+2.2
5,522,073	-		Pf6N2E2_4779	0.52	-0.4
5,522,137	-		Pf6N2E2_4779	0.66	-1.3
5,522,325	+				-0.5
5,522,325	+				-0.4
5,522,325	+				-0.1
5,522,325	+				+0.0
5,522,325	+				-1.2
5,522,331	-				-0.5
5,522,331	-				+1.6
5,522,331	-				+0.5
5,522,331	-				-0.4
5,522,351	+				-1.1
5,522,351	+				-0.5
5,522,352	-				+1.1
5,522,352	-				+0.6
5,522,398	+				-0.5
5,522,398	+				-0.8
5,522,399	-				+0.4
5,522,399	-				-0.4
5,522,461	+				-1.8
5,522,462	-				+0.5
5,522,462	-				-0.6
5,522,539	+				-0.0
5,522,539	+				-0.2
5,522,539	+				+0.4
5,522,539	+				+0.2
5,522,539	+				+0.8
5,522,539	+				-0.8
5,522,539	+				+1.0
5,522,539	+				+0.9
5,522,539	+				+0.5
5,522,539	+				-0.4
5,522,540	-				+0.7
5,522,540	-				+0.1
5,522,540	-				-0.2
5,522,540	-				+1.1
5,522,540	-				+1.5
5,522,540	-				-0.5
5,522,822	+		Pf6N2E2_4780	0.21	-0.4
5,522,823	-		Pf6N2E2_4780	0.21	+1.3
5,522,952	+		Pf6N2E2_4780	0.26	+0.5
5,522,953	-		Pf6N2E2_4780	0.26	-0.8
5,522,981	+		Pf6N2E2_4780	0.28	-0.7
5,522,981	+		Pf6N2E2_4780	0.28	+0.6
5,522,981	+		Pf6N2E2_4780	0.28	-1.0
5,522,981	+		Pf6N2E2_4780	0.28	-0.5
5,522,981	+		Pf6N2E2_4780	0.28	-0.1
5,522,982	-		Pf6N2E2_4780	0.28	-0.0
5,523,251	+		Pf6N2E2_4780	0.39	-0.2
5,523,587	+		Pf6N2E2_4780	0.53	+0.0
5,523,588	-		Pf6N2E2_4780	0.53	-1.0
5,523,638	+		Pf6N2E2_4780	0.55	+0.4
5,523,638	+		Pf6N2E2_4780	0.55	-0.3
5,523,638	+		Pf6N2E2_4780	0.55	+0.1
5,523,638	+		Pf6N2E2_4780	0.55	+0.0
5,523,639	-		Pf6N2E2_4780	0.55	-0.3
5,523,639	-		Pf6N2E2_4780	0.55	+0.6
5,523,639	-		Pf6N2E2_4780	0.55	-0.4
5,523,639	-		Pf6N2E2_4780	0.55	-0.2
5,523,788	-		Pf6N2E2_4780	0.62	+0.0
5,523,788	-		Pf6N2E2_4780	0.62	+0.8
5,523,960	+		Pf6N2E2_4780	0.69	+1.3
5,523,960	+		Pf6N2E2_4780	0.69	-2.9
5,523,961	-		Pf6N2E2_4780	0.69	-0.7
5,523,961	-		Pf6N2E2_4780	0.69	-0.1
5,524,160	+		Pf6N2E2_4780	0.77	+0.3
5,524,160	+		Pf6N2E2_4780	0.77	+0.9
5,524,161	-		Pf6N2E2_4780	0.77	+0.3
5,524,232	+		Pf6N2E2_4780	0.80	-1.0
5,524,233	-		Pf6N2E2_4780	0.81	-1.5
5,524,233	-		Pf6N2E2_4780	0.81	-0.5
5,524,301	+		Pf6N2E2_4780	0.83	-1.5
5,524,301	+		Pf6N2E2_4780	0.83	-0.1
5,524,302	-		Pf6N2E2_4780	0.83	+0.2
5,524,310	+		Pf6N2E2_4780	0.84	-1.1
5,524,310	+		Pf6N2E2_4780	0.84	-0.7
5,524,311	-		Pf6N2E2_4780	0.84	-0.6
5,524,311	-		Pf6N2E2_4780	0.84	+0.0
5,524,311	-		Pf6N2E2_4780	0.84	-0.1
5,524,311	-		Pf6N2E2_4780	0.84	+0.2
5,524,670	-				-0.7
5,524,802	-				+0.5
5,524,802	-				+0.2
5,524,814	+				-1.1
5,524,814	+				+1.3
5,524,815	-				+0.4
5,524,815	-				+0.6
5,524,817	+				+0.8
5,524,817	+				+1.6
5,524,817	+				+1.1
5,524,817	+				-0.3
5,524,817	+				+0.4
5,524,818	-				-1.4
5,524,818	-				+0.3
5,524,818	-				+0.4
5,524,818	-				+0.5
5,524,898	+				-0.9
5,524,898	+				-1.0
5,524,899	-				+1.4
5,524,899	-				+0.6
5,524,899	-				+0.0
5,524,950	+				+0.4
5,524,950	+				+0.4
5,524,951	-				+0.0
5,525,165	-				+0.1
5,525,165	-				-0.4
5,525,165	-				-0.2
5,525,193	+				+2.8
5,525,193	+				+1.0
5,525,194	-				+0.1
5,525,194	-				-1.0
5,525,194	-				-0.0
5,525,194	-				+0.8
5,525,194	-				-0.6
5,525,194	-				-0.1
5,525,209	+				+0.3
5,525,209	+				+1.5
5,525,210	-				-0.1
5,525,221	+				+1.0
5,525,237	+				+1.4
5,525,238	-				+0.2
5,525,238	-				+1.5
5,525,266	-				+1.1
5,525,302	-				+0.8
5,525,302	-				-0.1
5,525,302	-				-0.6
5,525,304	+				-1.1
5,525,305	-				+0.3
5,525,305	-				+0.3
5,525,305	-				+0.9
5,525,305	-				-1.2
5,525,306	+				+0.3
5,525,307	-				+0.1
5,525,307	-				+0.2
5,525,307	-				-0.3
5,525,307	-				+0.0
5,525,307	-				-1.3
5,525,307	-				+0.5
5,525,310	+				+0.9
5,525,310	+				+0.3
5,525,311	-				+0.6
5,525,311	-				+0.7
5,525,317	+				-0.6
5,525,317	+				+1.1
5,525,317	+				+0.1
5,525,317	+				+1.3
5,525,317	+				+1.2
5,525,317	+				+0.8
5,525,318	-				-0.2
5,525,318	-				-1.7
5,525,318	-				+0.4
5,525,318	-				+0.0
5,525,318	-				-0.1
5,525,318	-				+1.3
5,525,318	-				-0.2
5,525,318	-				+0.8
5,525,318	-				+0.3
5,525,318	-				-1.4
5,525,318	-				-0.8
5,525,318	-				+1.4
5,525,337	+				+0.3
5,525,338	-				+0.3
5,525,432	+				+2.1
5,525,433	-				-0.4
5,525,433	-				-0.5
5,525,433	-				-1.8
5,525,436	+				-1.4
5,525,436	+				+0.0
5,525,436	+				-1.0
5,525,436	+				+0.4
5,525,437	-				-0.8
5,525,462	+				-0.5
5,525,463	-				-0.2
5,525,463	-				+1.8
5,525,463	-				-0.1
5,525,481	-				+0.9
5,525,495	+				-0.4
5,525,496	-				+1.1
5,525,496	-				+0.2
5,525,496	-				+0.4
5,525,496	-				+0.2
5,525,499	-				+0.0
5,525,563	+				-1.6
5,525,565	+				+0.3
5,525,565	+				+0.5
5,525,565	+				+0.8
5,525,565	+				+0.6
5,525,566	-				+0.1
5,525,566	-				+0.8
5,525,566	-				-0.5
5,525,566	-				+0.9
5,525,566	-				+0.7
5,525,566	-				+0.5
5,525,566	-				-0.4
5,525,566	-				-1.0
5,525,566	-				+1.8
5,525,566	-				-0.5
5,525,566	-				+1.0
5,525,566	-				+1.9
5,525,572	+				+0.6
5,525,572	+				+0.7
5,525,573	-				+1.7
5,525,573	-				-0.2
5,525,590	+				+0.4
5,525,590	+				+0.4