Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3437

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
4,003,606	+		Pf6N2E2_3436	0.78	+0.6
4,003,606	+		Pf6N2E2_3436	0.78	+0.7
4,003,606	+		Pf6N2E2_3436	0.78	+1.2
4,003,607	-		Pf6N2E2_3436	0.78	-0.4
4,003,607	-		Pf6N2E2_3436	0.78	+0.7
4,003,607	-		Pf6N2E2_3436	0.78	-0.2
4,003,664	-		Pf6N2E2_3436	0.79	+0.9
4,003,748	+		Pf6N2E2_3436	0.81	-0.2
4,003,748	+		Pf6N2E2_3436	0.81	+0.1
4,003,748	+		Pf6N2E2_3436	0.81	+0.3
4,003,749	-		Pf6N2E2_3436	0.81	+0.6
4,003,749	-		Pf6N2E2_3436	0.81	-0.5
4,003,766	-		Pf6N2E2_3436	0.81	+0.8
4,003,784	+		Pf6N2E2_3436	0.82	+0.5
4,003,784	+		Pf6N2E2_3436	0.82	-0.2
4,003,784	+		Pf6N2E2_3436	0.82	-0.1
4,003,785	-		Pf6N2E2_3436	0.82	+1.0
4,003,785	-		Pf6N2E2_3436	0.82	-0.4
4,003,894	+		Pf6N2E2_3436	0.84	+1.2
4,003,894	+		Pf6N2E2_3436	0.84	-0.0
4,003,894	+		Pf6N2E2_3436	0.84	-0.3
4,003,894	+		Pf6N2E2_3436	0.84	+0.5
4,003,895	-		Pf6N2E2_3436	0.84	-0.1
4,003,895	-		Pf6N2E2_3436	0.84	+0.3
4,003,895	-		Pf6N2E2_3436	0.84	+0.8
4,004,001	+		Pf6N2E2_3436	0.86	+0.1
4,004,001	+		Pf6N2E2_3436	0.86	-2.0
4,004,002	-		Pf6N2E2_3436	0.86	-0.2
4,004,234	-				+0.1
4,004,329	+				+1.0
4,004,329	+				+0.2
4,004,330	-				+0.2
4,004,359	+				-0.3
4,004,369	-				+1.3
4,004,389	+				+0.1
4,004,389	+				+0.6
4,004,389	+				+0.6
4,004,440	+				-0.4
4,004,441	-				+0.2
4,004,441	-				-1.4
4,004,441	-				+1.2
4,004,498	-				+0.4
4,004,498	-				+1.2
4,004,498	-				+0.4
4,004,498	-				+0.4
4,004,498	-				+0.4
4,004,528	-				-1.5
4,004,528	-				-1.1
4,004,682	+				+0.3
4,004,818	-				-0.8
4,005,249	+		Pf6N2E2_3437	0.23	-1.1
4,005,352	+		Pf6N2E2_3437	0.27	+0.0
4,005,353	-		Pf6N2E2_3437	0.27	+0.1
4,005,362	+		Pf6N2E2_3437	0.27	+0.2
4,005,396	+		Pf6N2E2_3437	0.28	+0.3
4,005,634	-		Pf6N2E2_3437	0.37	+1.6
4,005,762	+		Pf6N2E2_3437	0.42	+0.0
4,005,762	+		Pf6N2E2_3437	0.42	-0.4
4,005,763	-		Pf6N2E2_3437	0.42	-0.1
4,005,769	-		Pf6N2E2_3437	0.42	+0.2
4,005,822	+		Pf6N2E2_3437	0.44	-0.7
4,005,823	-		Pf6N2E2_3437	0.44	+0.7
4,005,823	-		Pf6N2E2_3437	0.44	+0.7
4,005,823	-		Pf6N2E2_3437	0.44	-0.4
4,006,059	+		Pf6N2E2_3437	0.52	+1.5
4,006,059	+		Pf6N2E2_3437	0.52	+0.4
4,006,059	+		Pf6N2E2_3437	0.52	+1.6
4,006,059	+		Pf6N2E2_3437	0.52	+0.5
4,006,060	-		Pf6N2E2_3437	0.52	+0.1
4,006,060	-		Pf6N2E2_3437	0.52	-0.2
4,006,060	-		Pf6N2E2_3437	0.52	-0.6
4,006,060	-		Pf6N2E2_3437	0.52	+1.0
4,006,060	-		Pf6N2E2_3437	0.52	+0.4
4,006,096	-		Pf6N2E2_3437	0.53	-1.3
4,006,308	+		Pf6N2E2_3437	0.61	+0.4
4,006,308	+		Pf6N2E2_3437	0.61	-0.5
4,006,309	-		Pf6N2E2_3437	0.61	+0.4
4,006,309	-		Pf6N2E2_3437	0.61	-0.5
4,006,309	-		Pf6N2E2_3437	0.61	-1.5
4,006,309	-		Pf6N2E2_3437	0.61	-1.0
4,006,375	+		Pf6N2E2_3437	0.63	+0.1
4,006,376	-		Pf6N2E2_3437	0.64	-0.2
4,006,376	-		Pf6N2E2_3437	0.64	+0.3
4,006,376	-		Pf6N2E2_3437	0.64	-0.0
4,006,376	-		Pf6N2E2_3437	0.64	+0.4
4,006,376	-		Pf6N2E2_3437	0.64	-0.1
4,006,376	-		Pf6N2E2_3437	0.64	-0.6
4,006,380	+		Pf6N2E2_3437	0.64	-1.8
4,006,381	-		Pf6N2E2_3437	0.64	+0.1
4,006,381	-		Pf6N2E2_3437	0.64	+0.7
4,006,413	+		Pf6N2E2_3437	0.65	-1.1
4,006,413	+		Pf6N2E2_3437	0.65	+0.7
4,006,413	+		Pf6N2E2_3437	0.65	+0.1
4,006,413	+		Pf6N2E2_3437	0.65	-0.8
4,006,413	+		Pf6N2E2_3437	0.65	-1.7
4,006,414	-		Pf6N2E2_3437	0.65	-1.3
4,006,414	-		Pf6N2E2_3437	0.65	+2.0
4,006,414	-		Pf6N2E2_3437	0.65	+0.7
4,006,414	-		Pf6N2E2_3437	0.65	-1.4
4,006,416	+		Pf6N2E2_3437	0.65	-0.2
4,006,416	+		Pf6N2E2_3437	0.65	+0.3
4,006,416	+		Pf6N2E2_3437	0.65	-1.2
4,006,416	+		Pf6N2E2_3437	0.65	+0.1
4,006,416	+		Pf6N2E2_3437	0.65	+0.7
4,006,417	-		Pf6N2E2_3437	0.65	+1.1
4,006,419	+		Pf6N2E2_3437	0.65	-0.9
4,006,431	+		Pf6N2E2_3437	0.65	+0.4
4,006,431	+		Pf6N2E2_3437	0.65	-1.4
4,006,431	+		Pf6N2E2_3437	0.65	-0.0
4,006,431	+		Pf6N2E2_3437	0.65	+0.5
4,006,432	-		Pf6N2E2_3437	0.66	-2.6
4,006,434	+		Pf6N2E2_3437	0.66	-0.1
4,006,434	+		Pf6N2E2_3437	0.66	-1.3
4,006,435	-		Pf6N2E2_3437	0.66	+0.0
4,006,435	-		Pf6N2E2_3437	0.66	+0.5
4,006,500	+		Pf6N2E2_3437	0.68	+0.6
4,006,500	+		Pf6N2E2_3437	0.68	-0.8
4,006,501	-		Pf6N2E2_3437	0.68	+1.1
4,006,501	-		Pf6N2E2_3437	0.68	-0.2
4,006,632	+		Pf6N2E2_3437	0.73	-0.5
4,006,633	-		Pf6N2E2_3437	0.73	+0.0
4,006,633	-		Pf6N2E2_3437	0.73	-0.1
4,006,633	-		Pf6N2E2_3437	0.73	+0.8
4,006,633	-		Pf6N2E2_3437	0.73	-2.8
4,006,646	-		Pf6N2E2_3437	0.73	+0.7
4,006,665	-		Pf6N2E2_3437	0.74	+0.6
4,006,725	+		Pf6N2E2_3437	0.76	-0.8
4,006,725	+		Pf6N2E2_3437	0.76	-0.9
4,006,725	+		Pf6N2E2_3437	0.76	+0.1
4,006,725	+		Pf6N2E2_3437	0.76	-0.7
4,006,725	+		Pf6N2E2_3437	0.76	+0.2
4,006,731	+		Pf6N2E2_3437	0.76	+0.3
4,006,732	-		Pf6N2E2_3437	0.76	-0.8
4,006,732	-		Pf6N2E2_3437	0.76	+0.5
4,006,804	-		Pf6N2E2_3437	0.79	-0.5
4,006,804	-		Pf6N2E2_3437	0.79	+0.3
4,006,804	-		Pf6N2E2_3437	0.79	-0.1
4,006,824	+		Pf6N2E2_3437	0.80	-0.9
4,006,824	+		Pf6N2E2_3437	0.80	-0.7
4,006,825	-		Pf6N2E2_3437	0.80	+0.3
4,006,863	+		Pf6N2E2_3437	0.81	-1.0
4,006,864	-		Pf6N2E2_3437	0.81	-0.2
4,006,864	-		Pf6N2E2_3437	0.81	-1.1
4,006,864	-		Pf6N2E2_3437	0.81	-0.4
4,006,905	+		Pf6N2E2_3437	0.82	-1.0
4,006,906	-		Pf6N2E2_3437	0.83	-0.3
4,006,906	-		Pf6N2E2_3437	0.83	+0.2
4,006,919	-		Pf6N2E2_3437	0.83	+0.2
4,006,930	-		Pf6N2E2_3437	0.83	-0.5
4,006,969	+		Pf6N2E2_3437	0.85	-0.4
4,006,969	+		Pf6N2E2_3437	0.85	-0.6
4,006,969	+		Pf6N2E2_3437	0.85	+0.8
4,006,969	+		Pf6N2E2_3437	0.85	+0.8
4,006,970	-		Pf6N2E2_3437	0.85	-0.3
4,006,970	-		Pf6N2E2_3437	0.85	-0.8
4,007,066	+		Pf6N2E2_3437	0.88	-1.9
4,007,095	+		Pf6N2E2_3437	0.89	-0.8
4,007,095	+		Pf6N2E2_3437	0.89	+1.2
4,007,150	-				+0.3
4,007,197	+				-0.8
4,007,213	-				+0.5
4,007,313	+				-0.1
4,007,322	+				+0.5
4,007,322	+				-1.1
4,007,323	-				-0.4
4,007,344	+				-0.5
4,007,344	+				+0.4
4,007,345	-				-0.1
4,007,391	+				-0.1
4,007,391	+				-1.2
4,007,392	-				+0.4
4,007,392	-				-1.8
4,007,392	-				+0.2
4,007,392	-				+0.5
4,007,392	-				-1.0
4,007,614	-		Pf6N2E2_3438	0.58	-0.8
4,007,614	-		Pf6N2E2_3438	0.58	+1.6
4,007,642	-		Pf6N2E2_3438	0.66	+0.3
4,007,642	-		Pf6N2E2_3438	0.66	-0.7
4,007,685	-		Pf6N2E2_3438	0.77	+1.0
4,007,704	+		Pf6N2E2_3438	0.82	-0.1
4,007,704	+		Pf6N2E2_3438	0.82	-1.0
4,007,704	+		Pf6N2E2_3438	0.82	-0.1
4,007,704	+		Pf6N2E2_3438	0.82	+0.6
4,007,704	+		Pf6N2E2_3438	0.82	+1.1
4,007,705	-		Pf6N2E2_3438	0.83	-0.2
4,007,709	+		Pf6N2E2_3438	0.84	-1.1
4,007,710	-		Pf6N2E2_3438	0.84	-0.6
4,007,710	-		Pf6N2E2_3438	0.84	-0.8
4,007,799	+				+0.6
4,007,799	+				+0.4
4,007,799	+				-1.3
4,007,799	+				-0.1
4,007,799	+				+0.5
4,007,799	+				-0.2
4,007,800	-				+1.2
4,007,800	-				+0.6
4,007,800	-				+0.8
4,007,800	-				-0.7
4,007,800	-				-0.3
4,007,800	-				+0.0
4,007,800	-				+0.1
4,007,800	-				+1.7
4,007,814	+				+0.9
4,007,852	+				-0.1
4,007,853	-				-0.5
4,007,860	+				+0.8
4,007,863	+				-0.0
4,007,864	-				+0.5
4,008,334	-		Pf6N2E2_3439	0.29	-0.7
4,008,355	+		Pf6N2E2_3439	0.31	+0.2
4,008,356	-		Pf6N2E2_3439	0.31	-0.1
4,008,356	-		Pf6N2E2_3439	0.31	+0.9
4,008,358	+		Pf6N2E2_3439	0.31	-1.4
4,008,358	+		Pf6N2E2_3439	0.31	-0.5
4,008,358	+		Pf6N2E2_3439	0.31	+1.2
4,008,358	+		Pf6N2E2_3439	0.31	+0.5
4,008,358	+		Pf6N2E2_3439	0.31	-0.1
4,008,359	-		Pf6N2E2_3439	0.31	+1.0
4,008,359	-		Pf6N2E2_3439	0.31	-1.0