Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2890

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
3,378,006	+		Pf6N2E2_2889	0.42	-0.2
3,378,006	+		Pf6N2E2_2889	0.42	-2.7
3,378,006	+		Pf6N2E2_2889	0.42	-1.1
3,378,006	+		Pf6N2E2_2889	0.42	-1.0
3,378,006	+		Pf6N2E2_2889	0.42	-0.3
3,378,006	+		Pf6N2E2_2889	0.42	-0.4
3,378,006	+		Pf6N2E2_2889	0.42	-1.6
3,378,006	+		Pf6N2E2_2889	0.42	-2.0
3,378,006	+		Pf6N2E2_2889	0.42	-0.2
3,378,006	+		Pf6N2E2_2889	0.42	-0.8
3,378,007	-		Pf6N2E2_2889	0.42	+0.1
3,378,007	-		Pf6N2E2_2889	0.42	-0.3
3,378,007	-		Pf6N2E2_2889	0.42	+0.1
3,378,007	-		Pf6N2E2_2889	0.42	-1.8
3,378,007	-		Pf6N2E2_2889	0.42	-0.7
3,378,007	-		Pf6N2E2_2889	0.42	+0.7
3,378,007	-		Pf6N2E2_2889	0.42	-2.5
3,378,007	-		Pf6N2E2_2889	0.42	+0.4
3,378,007	-		Pf6N2E2_2889	0.42	+1.3
3,378,007	-		Pf6N2E2_2889	0.42	-1.3
3,378,007	-		Pf6N2E2_2889	0.42	-1.7
3,378,105	+		Pf6N2E2_2889	0.51	-0.7
3,378,105	+		Pf6N2E2_2889	0.51	+1.1
3,378,105	+		Pf6N2E2_2889	0.51	-0.5
3,378,105	+		Pf6N2E2_2889	0.51	-1.2
3,378,106	-		Pf6N2E2_2889	0.51	+0.7
3,378,106	-		Pf6N2E2_2889	0.51	-0.7
3,378,106	-		Pf6N2E2_2889	0.51	-0.8
3,378,207	+		Pf6N2E2_2889	0.60	-1.9
3,378,208	-		Pf6N2E2_2889	0.60	-1.6
3,378,208	-		Pf6N2E2_2889	0.60	+1.7
3,378,420	+		Pf6N2E2_2889	0.78	-1.3
3,378,421	-		Pf6N2E2_2889	0.78	-1.4
3,378,639	+				-1.8
3,378,639	+				-2.6
3,378,639	+				-1.6
3,378,639	+				-1.2
3,378,639	+				+0.7
3,378,639	+				-1.6
3,378,639	+				-0.3
3,378,640	-				-2.2
3,378,640	-				-0.8
3,378,640	-				-2.8
3,378,640	-				-0.9
3,378,640	-				-1.5
3,378,640	-				-0.3
3,378,640	-				-0.6
3,378,640	-				-0.5
3,378,650	+				-1.7
3,378,650	+				+0.2
3,378,650	+				-0.9
3,378,650	+				-0.2
3,378,650	+				-0.3
3,378,650	+				-0.7
3,378,651	-				+0.7
3,378,651	-				+1.3
3,378,680	+				-0.2
3,378,681	-				-1.3
3,378,719	+				+0.1
3,378,719	+				-0.5
3,378,719	+				-0.2
3,378,719	+				-0.6
3,378,719	+				-0.5
3,378,720	-				-0.5
3,378,737	+				-0.1
3,378,737	+				-2.0
3,378,737	+				+0.7
3,378,737	+				-1.4
3,378,737	+				+0.4
3,378,737	+				-0.4
3,378,737	+				-0.8
3,378,738	-				+0.3
3,378,738	-				-1.0
3,378,738	-				-1.6
3,378,791	+		Pf6N2E2_2890	0.13	-0.4
3,378,791	+		Pf6N2E2_2890	0.13	-3.4
3,378,792	-		Pf6N2E2_2890	0.13	+0.0
3,378,792	-		Pf6N2E2_2890	0.13	-0.6
3,378,792	-		Pf6N2E2_2890	0.13	-1.3
3,379,031	+		Pf6N2E2_2890	0.42	-1.2
3,379,031	+		Pf6N2E2_2890	0.42	-1.2
3,379,031	+		Pf6N2E2_2890	0.42	-1.2
3,379,032	-		Pf6N2E2_2890	0.42	-0.6
3,379,032	-		Pf6N2E2_2890	0.42	-0.7
3,379,032	-		Pf6N2E2_2890	0.42	+0.2
3,379,032	-		Pf6N2E2_2890	0.42	-2.9
3,379,032	-		Pf6N2E2_2890	0.42	-0.4
3,379,032	-		Pf6N2E2_2890	0.42	-0.0
3,379,034	+		Pf6N2E2_2890	0.42	+0.0
3,379,035	-		Pf6N2E2_2890	0.42	-1.6
3,379,035	-		Pf6N2E2_2890	0.42	+0.6
3,379,035	-		Pf6N2E2_2890	0.42	-1.2
3,379,035	-		Pf6N2E2_2890	0.42	-2.7
3,379,035	-		Pf6N2E2_2890	0.42	-0.0
3,379,307	+		Pf6N2E2_2890	0.74	+0.0
3,379,442	+				-0.2
3,379,443	-				+0.2
3,379,443	-				-0.9
3,379,451	-				-0.9
3,379,473	-				-1.4
3,379,473	-				-0.3
3,379,518	+				-0.3
3,379,518	+				-1.9
3,379,518	+				-1.5
3,379,518	+				-0.9
3,379,519	-				-0.3
3,379,549	-				-2.0
3,379,549	-				-0.2
3,379,554	+				-1.4
3,379,555	-				-0.3
3,379,555	-				-0.0
3,379,644	+		Pf6N2E2_2891	0.14	-0.4
3,379,644	+		Pf6N2E2_2891	0.14	-0.5
3,379,644	+		Pf6N2E2_2891	0.14	+0.0
3,379,645	-		Pf6N2E2_2891	0.14	-1.1
3,379,645	-		Pf6N2E2_2891	0.14	+0.8
3,379,645	-		Pf6N2E2_2891	0.14	-0.0
3,379,794	+		Pf6N2E2_2891	0.31	-1.2
3,379,795	-		Pf6N2E2_2891	0.31	-1.9
3,379,926	+		Pf6N2E2_2891	0.46	-1.3
3,379,926	+		Pf6N2E2_2891	0.46	-1.8
3,379,927	-		Pf6N2E2_2891	0.46	-1.1
3,379,927	-		Pf6N2E2_2891	0.46	-0.8
3,379,927	-		Pf6N2E2_2891	0.46	-0.1
3,380,076	+		Pf6N2E2_2891	0.63	-1.0
3,380,076	+		Pf6N2E2_2891	0.63	-0.0
3,380,076	+		Pf6N2E2_2891	0.63	-0.4
3,380,077	-		Pf6N2E2_2891	0.63	-0.4
3,380,077	-		Pf6N2E2_2891	0.63	-2.4
3,380,090	-		Pf6N2E2_2891	0.64	-1.0
3,380,232	+		Pf6N2E2_2891	0.80	-0.5
3,380,256	+		Pf6N2E2_2891	0.83	-1.6
3,380,257	-		Pf6N2E2_2891	0.83	+1.7
3,380,257	-		Pf6N2E2_2891	0.83	-1.9
3,380,308	+		Pf6N2E2_2891	0.88	-0.2
3,380,309	-		Pf6N2E2_2891	0.89	-1.2
3,380,309	-		Pf6N2E2_2891	0.89	-1.2
3,380,309	-		Pf6N2E2_2891	0.89	-0.6
3,380,309	-		Pf6N2E2_2891	0.89	+0.3
3,380,309	-		Pf6N2E2_2891	0.89	-0.6
3,380,309	-		Pf6N2E2_2891	0.89	-2.2
3,380,309	-		Pf6N2E2_2891	0.89	+0.1
3,380,309	-		Pf6N2E2_2891	0.89	-2.1
3,380,309	-		Pf6N2E2_2891	0.89	-1.8
3,380,310	+		Pf6N2E2_2891	0.89	-1.0
3,380,310	+		Pf6N2E2_2891	0.89	-0.4
3,380,311	-		Pf6N2E2_2891	0.89	-1.6
3,380,311	-		Pf6N2E2_2891	0.89	-0.5
3,380,316	+		Pf6N2E2_2891	0.89	-0.7
3,380,316	+		Pf6N2E2_2891	0.89	-1.2
3,380,316	+		Pf6N2E2_2891	0.89	+0.5
3,380,316	+		Pf6N2E2_2891	0.89	-0.9
3,380,316	+		Pf6N2E2_2891	0.89	+1.1
3,380,316	+		Pf6N2E2_2891	0.89	-0.6
3,380,316	+		Pf6N2E2_2891	0.89	-0.9
3,380,316	+		Pf6N2E2_2891	0.89	-0.5
3,380,316	+		Pf6N2E2_2891	0.89	-1.0
3,380,316	+		Pf6N2E2_2891	0.89	-3.3
3,380,316	+		Pf6N2E2_2891	0.89	-2.2
3,380,316	+		Pf6N2E2_2891	0.89	-0.4
3,380,316	+		Pf6N2E2_2891	0.89	-1.1
3,380,316	+		Pf6N2E2_2891	0.89	-1.0
3,380,316	+		Pf6N2E2_2891	0.89	-1.1
3,380,317	-		Pf6N2E2_2891	0.89	-0.8
3,380,317	-		Pf6N2E2_2891	0.89	-2.0
3,380,317	-		Pf6N2E2_2891	0.89	-0.3
3,380,317	-		Pf6N2E2_2891	0.89	+0.3
3,380,317	-		Pf6N2E2_2891	0.89	-1.1
3,380,446	+				+0.4
3,380,446	+				-0.9
3,380,446	+				-0.1
3,380,446	+				-0.6
3,380,447	-				+1.1
3,380,447	-				-0.0
3,380,492	+				-0.6