Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS15710

Experiment: R2A with chromate 0.0048828125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with chromate 0.0048828125 mM
3,460,467	+		LRK54_RS15700	0.72	+1.2
3,460,467	+		LRK54_RS15700	0.72	-1.1
3,460,467	+		LRK54_RS15700	0.72	-0.5
3,460,467	+		LRK54_RS15700	0.72	-0.5
3,460,467	+		LRK54_RS15700	0.72	+1.7
3,460,467	+		LRK54_RS15700	0.72	+1.2
3,460,467	+		LRK54_RS15700	0.72	-0.5
3,460,468	-		LRK54_RS15700	0.72	-0.5
3,460,468	-		LRK54_RS15700	0.72	+0.4
3,460,468	-		LRK54_RS15700	0.72	-0.5
3,460,468	-		LRK54_RS15700	0.72	-0.5
3,460,468	-		LRK54_RS15700	0.72	-1.5
3,460,468	-		LRK54_RS15700	0.72	-0.8
3,460,468	-		LRK54_RS15700	0.72	+0.5
3,460,468	-		LRK54_RS15700	0.72	-1.4
3,460,468	-		LRK54_RS15700	0.72	+2.0
3,460,468	-		LRK54_RS15700	0.72	+0.1
3,460,741	+				-0.5
3,460,741	+				+0.7
3,460,742	-				+0.0
3,460,805	+				+0.7
3,460,805	+				-0.9
3,460,805	+				-0.4
3,460,805	+				+1.1
3,460,805	+				-0.2
3,460,806	-				+0.2
3,460,806	-				+1.2
3,460,806	-				+1.0
3,460,806	-				-0.6
3,461,334	+				+1.2
3,461,334	+				+0.3
3,461,334	+				-1.4
3,461,334	+				-1.5
3,461,334	+				+1.2
3,461,334	+				-2.4
3,461,334	+				-0.1
3,461,334	+				-1.4
3,461,334	+				-0.2
3,461,334	+				+1.2
3,461,334	+				+0.5
3,461,334	+				-0.3
3,461,334	+				+1.2
3,461,334	+				+0.1
3,461,334	+				+0.5
3,461,334	+				+0.5
3,461,334	+				-1.3
3,461,334	+				-0.2
3,461,334	+				+0.1
3,461,334	+				-0.1
3,461,334	+				-0.9
3,461,334	+				+1.0
3,461,334	+				-1.3
3,461,334	+				-1.0
3,461,334	+				-1.1
3,461,334	+				+0.1
3,461,334	+				-0.5
3,461,334	+				-0.5
3,461,334	+				+0.5
3,461,334	+				+0.8
3,461,334	+				-0.3
3,461,334	+				-1.1
3,461,334	+				-0.7
3,461,334	+				+1.7
3,461,334	+				+1.7
3,461,334	+				+0.7
3,461,334	+				-0.4
3,461,334	+				+0.4
3,461,334	+				-2.6
3,461,334	+				-1.3
3,461,334	+				+1.0
3,461,334	+				-0.7
3,461,334	+				-3.1
3,461,334	+				-0.9
3,461,334	+				+0.0
3,461,334	+				+0.7
3,461,334	+				+0.8
3,461,334	+				+0.2
3,461,335	-				+2.0
3,461,335	-				+1.0
3,461,335	-				+2.0
3,461,335	-				-0.6
3,461,335	-				+1.1
3,461,335	-				+0.8
3,461,335	-				-2.1
3,461,335	-				-0.6
3,461,335	-				-1.5
3,461,335	-				+0.3
3,461,335	-				-0.5
3,461,335	-				-1.2
3,461,335	-				-0.6
3,461,335	-				-0.1
3,461,335	-				-1.0
3,461,335	-				+1.0
3,461,335	-				-1.7
3,461,335	-				-0.7
3,461,335	-				+1.4
3,461,335	-				-1.0
3,461,335	-				+1.2
3,461,335	-				-0.6
3,461,335	-				-1.5
3,461,335	-				+1.2
3,461,335	-				+0.7
3,461,335	-				-0.4
3,461,345	+				-0.8
3,461,345	+				-0.0
3,461,345	+				+0.8
3,461,345	+				+0.8
3,461,345	+				-1.8
3,461,345	+				-0.4
3,461,346	-				+1.2
3,461,346	-				+1.0
3,461,346	-				+0.0
3,461,346	-				-0.8
3,461,346	-				-2.2
3,461,346	-				-3.2
3,461,346	-				-0.4
3,461,346	-				-0.8
3,461,346	-				+4.0
3,461,423	+				-0.5
3,461,423	+				-0.7
3,461,423	+				-1.8
3,461,423	+				-0.5
3,461,423	+				+0.4
3,461,423	+				+0.4
3,461,423	+				-1.1
3,461,423	+				-0.7
3,461,423	+				+0.3
3,461,423	+				-0.2
3,461,423	+				-0.8
3,461,423	+				+0.5
3,461,423	+				-0.2
3,461,424	-				+0.8
3,461,424	-				+1.2
3,461,424	-				-0.6
3,461,424	-				-0.3
3,461,424	-				+3.3
3,461,424	-				+2.0
3,461,424	-				-0.2
3,461,426	-				+0.4
3,461,426	-				-0.5
3,461,426	-				-1.1
3,461,426	-				-1.2
3,461,426	-				-0.2
3,461,426	-				+1.0
3,461,426	-				+2.0
3,461,509	+		LRK54_RS15710	0.13	+0.8
3,461,509	+		LRK54_RS15710	0.13	-0.5
3,461,509	+		LRK54_RS15710	0.13	+1.7
3,461,509	+		LRK54_RS15710	0.13	-0.4
3,461,509	+		LRK54_RS15710	0.13	-0.2
3,461,509	+		LRK54_RS15710	0.13	-0.6
3,461,510	-		LRK54_RS15710	0.13	+0.1
3,461,510	-		LRK54_RS15710	0.13	-0.2
3,461,527	+		LRK54_RS15710	0.18	-0.7
3,461,527	+		LRK54_RS15710	0.18	-0.8
3,461,527	+		LRK54_RS15710	0.18	-1.7
3,461,527	+		LRK54_RS15710	0.18	+1.0
3,461,527	+		LRK54_RS15710	0.18	-2.1
3,461,527	+		LRK54_RS15710	0.18	-0.2
3,461,527	+		LRK54_RS15710	0.18	-1.1
3,461,527	+		LRK54_RS15710	0.18	+1.4
3,461,527	+		LRK54_RS15710	0.18	+1.7
3,461,527	+		LRK54_RS15710	0.18	-0.3
3,461,527	+		LRK54_RS15710	0.18	-3.1
3,461,527	+		LRK54_RS15710	0.18	+2.7
3,461,527	+		LRK54_RS15710	0.18	+2.0
3,461,527	+		LRK54_RS15710	0.18	+1.2
3,461,527	+		LRK54_RS15710	0.18	-1.7
3,461,527	+		LRK54_RS15710	0.18	+0.0
3,461,527	+		LRK54_RS15710	0.18	-1.7
3,461,527	+		LRK54_RS15710	0.18	-0.6
3,461,527	+		LRK54_RS15710	0.18	+2.0
3,461,527	+		LRK54_RS15710	0.18	-0.7
3,461,527	+		LRK54_RS15710	0.18	-0.0
3,461,527	+		LRK54_RS15710	0.18	-0.2
3,461,527	+		LRK54_RS15710	0.18	-1.6
3,461,527	+		LRK54_RS15710	0.18	+1.1
3,461,527	+		LRK54_RS15710	0.18	+1.0
3,461,527	+		LRK54_RS15710	0.18	+0.2
3,461,527	+		LRK54_RS15710	0.18	-0.2
3,461,527	+		LRK54_RS15710	0.18	-1.3
3,461,527	+		LRK54_RS15710	0.18	-0.3
3,461,527	+		LRK54_RS15710	0.18	+2.0
3,461,527	+		LRK54_RS15710	0.18	-3.1
3,461,527	+		LRK54_RS15710	0.18	-0.1
3,461,527	+		LRK54_RS15710	0.18	+0.0
3,461,527	+		LRK54_RS15710	0.18	-0.8
3,461,527	+		LRK54_RS15710	0.18	+0.5
3,461,527	+		LRK54_RS15710	0.18	-0.4
3,461,527	+		LRK54_RS15710	0.18	+0.7
3,461,527	+		LRK54_RS15710	0.18	+1.4
3,461,527	+		LRK54_RS15710	0.18	-0.8
3,461,527	+		LRK54_RS15710	0.18	+0.1
3,461,527	+		LRK54_RS15710	0.18	-2.9
3,461,527	+		LRK54_RS15710	0.18	-1.6
3,461,527	+		LRK54_RS15710	0.18	+0.7
3,461,527	+		LRK54_RS15710	0.18	+0.7
3,461,527	+		LRK54_RS15710	0.18	+0.8
3,461,527	+		LRK54_RS15710	0.18	-0.5
3,461,527	+		LRK54_RS15710	0.18	+1.8
3,461,527	+		LRK54_RS15710	0.18	-1.2
3,461,527	+		LRK54_RS15710	0.18	+0.2
3,461,528	-		LRK54_RS15710	0.19	+0.1
3,461,528	-		LRK54_RS15710	0.19	-2.8
3,461,528	-		LRK54_RS15710	0.19	-0.7
3,461,528	-		LRK54_RS15710	0.19	-1.8
3,461,528	-		LRK54_RS15710	0.19	+1.0
3,461,528	-		LRK54_RS15710	0.19	-0.7
3,461,528	-		LRK54_RS15710	0.19	-0.7
3,461,528	-		LRK54_RS15710	0.19	+0.7
3,461,528	-		LRK54_RS15710	0.19	+1.0
3,461,528	-		LRK54_RS15710	0.19	-1.0
3,461,528	-		LRK54_RS15710	0.19	+1.2
3,461,528	-		LRK54_RS15710	0.19	-1.3
3,461,528	-		LRK54_RS15710	0.19	+0.1
3,461,528	-		LRK54_RS15710	0.19	-1.5
3,461,528	-		LRK54_RS15710	0.19	+1.4
3,461,528	-		LRK54_RS15710	0.19	+2.4
3,461,528	-		LRK54_RS15710	0.19	-0.9
3,461,528	-		LRK54_RS15710	0.19	-1.4
3,461,528	-		LRK54_RS15710	0.19	+0.6
3,461,528	-		LRK54_RS15710	0.19	-1.0
3,461,528	-		LRK54_RS15710	0.19	+0.8
3,461,528	-		LRK54_RS15710	0.19	+1.2
3,461,528	-		LRK54_RS15710	0.19	-0.8
3,461,528	-		LRK54_RS15710	0.19	+0.7
3,461,528	-		LRK54_RS15710	0.19	+0.0
3,461,528	-		LRK54_RS15710	0.19	-2.8
3,461,528	-		LRK54_RS15710	0.19	-1.2
3,461,528	-		LRK54_RS15710	0.19	+0.1
3,461,528	-		LRK54_RS15710	0.19	-1.4
3,461,528	-		LRK54_RS15710	0.19	-1.5
3,461,528	-		LRK54_RS15710	0.19	-0.5
3,461,528	-		LRK54_RS15710	0.19	-0.6
3,461,528	-		LRK54_RS15710	0.19	-0.6
3,461,528	-		LRK54_RS15710	0.19	-2.1
3,461,528	-		LRK54_RS15710	0.19	-0.9
3,461,528	-		LRK54_RS15710	0.19	-0.7
3,461,528	-		LRK54_RS15710	0.19	+2.7
3,461,528	-		LRK54_RS15710	0.19	-1.1
3,461,528	-		LRK54_RS15710	0.19	-1.5
3,461,528	-		LRK54_RS15710	0.19	-0.2
3,461,528	-		LRK54_RS15710	0.19	-1.3
3,461,528	-		LRK54_RS15710	0.19	+0.2
3,461,528	-		LRK54_RS15710	0.19	+1.2
3,461,528	-		LRK54_RS15710	0.19	+0.7
3,461,528	-		LRK54_RS15710	0.19	+0.9
3,461,528	-		LRK54_RS15710	0.19	+0.4
3,461,528	-		LRK54_RS15710	0.19	-0.6
3,461,528	-		LRK54_RS15710	0.19	+1.0
3,461,528	-		LRK54_RS15710	0.19	+0.1
3,461,528	-		LRK54_RS15710	0.19	-0.2
3,461,528	-		LRK54_RS15710	0.19	-1.5
3,461,817	+				+0.7
3,461,817	+				-0.1
3,461,817	+				+1.0
3,461,817	+				-0.4
3,461,817	+				-0.2
3,461,817	+				+0.2
3,461,817	+				-0.6
3,461,817	+				+0.3
3,461,817	+				-2.6
3,461,817	+				-1.0
3,461,817	+				+0.7
3,461,817	+				+0.7
3,461,817	+				+2.4
3,461,817	+				+1.4
3,461,817	+				+0.7
3,461,817	+				+1.0
3,461,817	+				+0.1
3,461,817	+				+1.4
3,461,818	-				+0.1
3,461,818	-				-0.3
3,461,818	-				-1.0
3,461,818	-				-0.0
3,461,818	-				+0.4
3,461,818	-				-0.5
3,461,818	-				+0.0
3,461,818	-				-1.2
3,461,818	-				-0.7
3,461,818	-				-1.2
3,461,818	-				+0.4
3,461,818	-				-0.5
3,461,818	-				+0.3
3,461,818	-				+1.5
3,461,818	-				+0.1
3,461,976	+		LRK54_RS15715	0.11	-0.6
3,462,195	+		LRK54_RS15715	0.25	-1.3
3,462,195	+		LRK54_RS15715	0.25	-0.0
3,462,195	+		LRK54_RS15715	0.25	+0.7
3,462,195	+		LRK54_RS15715	0.25	-0.3
3,462,195	+		LRK54_RS15715	0.25	+0.4
3,462,195	+		LRK54_RS15715	0.25	-1.0
3,462,195	+		LRK54_RS15715	0.25	-0.2
3,462,195	+		LRK54_RS15715	0.25	-1.5
3,462,195	+		LRK54_RS15715	0.25	-2.6
3,462,195	+		LRK54_RS15715	0.25	+4.0
3,462,195	+		LRK54_RS15715	0.25	-0.2
3,462,195	+		LRK54_RS15715	0.25	-1.6
3,462,195	+		LRK54_RS15715	0.25	+0.6
3,462,195	+		LRK54_RS15715	0.25	-1.0
3,462,196	-		LRK54_RS15715	0.25	-0.8
3,462,196	-		LRK54_RS15715	0.25	-0.7
3,462,196	-		LRK54_RS15715	0.25	-1.1
3,462,196	-		LRK54_RS15715	0.25	-0.9
3,462,196	-		LRK54_RS15715	0.25	+0.7
3,462,196	-		LRK54_RS15715	0.25	+0.3
3,462,196	-		LRK54_RS15715	0.25	-1.4
3,462,196	-		LRK54_RS15715	0.25	+1.7
3,462,365	+		LRK54_RS15715	0.36	-2.5
3,462,365	+		LRK54_RS15715	0.36	+1.7
3,462,366	-		LRK54_RS15715	0.36	+0.6
3,462,366	-		LRK54_RS15715	0.36	-0.5
3,462,434	+		LRK54_RS15715	0.41	-0.4
3,462,434	+		LRK54_RS15715	0.41	+0.2
3,462,434	+		LRK54_RS15715	0.41	-0.8
3,462,435	-		LRK54_RS15715	0.41	+2.7
3,462,435	-		LRK54_RS15715	0.41	-0.5
3,462,435	-		LRK54_RS15715	0.41	+1.0
3,462,615	+		LRK54_RS15715	0.53	-1.4
3,462,615	+		LRK54_RS15715	0.53	+0.0
3,462,616	-		LRK54_RS15715	0.53	-1.3
3,462,621	+		LRK54_RS15715	0.53	+0.7
3,462,621	+		LRK54_RS15715	0.53	-0.6
3,462,621	+		LRK54_RS15715	0.53	+0.2
3,462,621	+		LRK54_RS15715	0.53	-0.7
3,462,621	+		LRK54_RS15715	0.53	-1.2
3,462,621	+		LRK54_RS15715	0.53	+0.3
3,462,621	+		LRK54_RS15715	0.53	+0.6
3,462,621	+		LRK54_RS15715	0.53	+0.3
3,462,621	+		LRK54_RS15715	0.53	-3.0
3,462,621	+		LRK54_RS15715	0.53	-1.1
3,462,621	+		LRK54_RS15715	0.53	+0.6
3,462,621	+		LRK54_RS15715	0.53	-1.6
3,462,621	+		LRK54_RS15715	0.53	+0.1
3,462,622	-		LRK54_RS15715	0.53	-0.2
3,462,622	-		LRK54_RS15715	0.53	+2.0
3,462,622	-		LRK54_RS15715	0.53	+0.2
3,462,622	-		LRK54_RS15715	0.53	+0.6
3,462,622	-		LRK54_RS15715	0.53	+1.3
3,462,622	-		LRK54_RS15715	0.53	+1.2
3,462,622	-		LRK54_RS15715	0.53	-0.2
3,462,622	-		LRK54_RS15715	0.53	-0.5
3,462,622	-		LRK54_RS15715	0.53	-1.5
3,462,622	-		LRK54_RS15715	0.53	-1.5
3,462,622	-		LRK54_RS15715	0.53	-1.3
3,462,622	-		LRK54_RS15715	0.53	+0.8
3,462,622	-		LRK54_RS15715	0.53	-0.4
3,462,622	-		LRK54_RS15715	0.53	-0.8
3,462,633	+		LRK54_RS15715	0.54	-0.9
3,462,633	+		LRK54_RS15715	0.54	+0.4
3,462,633	+		LRK54_RS15715	0.54	+0.0
3,462,633	+		LRK54_RS15715	0.54	+1.6
3,462,634	-		LRK54_RS15715	0.54	-0.1
3,462,634	-		LRK54_RS15715	0.54	-0.4
3,462,634	-		LRK54_RS15715	0.54	+0.4
3,462,645	+		LRK54_RS15715	0.55	-1.6
3,462,645	+		LRK54_RS15715	0.55	-1.1
3,462,645	+		LRK54_RS15715	0.55	-0.8
3,462,645	+		LRK54_RS15715	0.55	+1.1
3,462,645	+		LRK54_RS15715	0.55	+1.3
3,462,645	+		LRK54_RS15715	0.55	-1.8
3,462,645	+		LRK54_RS15715	0.55	+0.7
3,462,646	-		LRK54_RS15715	0.55	+1.4
3,462,646	-		LRK54_RS15715	0.55	-0.4
3,462,646	-		LRK54_RS15715	0.55	-0.4
3,462,678	+		LRK54_RS15715	0.57	+1.4
3,462,678	+		LRK54_RS15715	0.57	-0.6
3,462,678	+		LRK54_RS15715	0.57	+1.2
3,462,678	+		LRK54_RS15715	0.57	-2.9
3,462,678	+		LRK54_RS15715	0.57	+0.4
3,462,678	+		LRK54_RS15715	0.57	+1.7
3,462,678	+		LRK54_RS15715	0.57	+2.4
3,462,678	+		LRK54_RS15715	0.57	-0.9
3,462,678	+		LRK54_RS15715	0.57	+0.2
3,462,678	+		LRK54_RS15715	0.57	+1.0
3,462,678	+		LRK54_RS15715	0.57	+0.0
3,462,678	+		LRK54_RS15715	0.57	-0.6
3,462,678	+		LRK54_RS15715	0.57	+1.2
3,462,678	+		LRK54_RS15715	0.57	-0.9
3,462,679	-		LRK54_RS15715	0.57	+1.2
3,462,679	-		LRK54_RS15715	0.57	-0.5
3,462,679	-		LRK54_RS15715	0.57	-0.9
3,462,679	-		LRK54_RS15715	0.57	-0.1
3,462,679	-		LRK54_RS15715	0.57	-3.8
3,462,679	-		LRK54_RS15715	0.57	-0.9
3,462,679	-		LRK54_RS15715	0.57	-0.7
3,462,679	-		LRK54_RS15715	0.57	-2.4
3,462,679	-		LRK54_RS15715	0.57	-0.3
3,462,679	-		LRK54_RS15715	0.57	-0.2
3,462,679	-		LRK54_RS15715	0.57	+0.1
3,462,679	-		LRK54_RS15715	0.57	-0.2
3,462,679	-		LRK54_RS15715	0.57	-2.4
3,462,679	-		LRK54_RS15715	0.57	-1.0
3,462,679	-		LRK54_RS15715	0.57	-0.9
3,462,679	-		LRK54_RS15715	0.57	-0.7
3,462,679	-		LRK54_RS15715	0.57	-1.1
3,462,679	-		LRK54_RS15715	0.57	-1.0
3,462,679	-		LRK54_RS15715	0.57	-1.1
3,462,679	-		LRK54_RS15715	0.57	+1.0
3,462,681	+		LRK54_RS15715	0.57	+0.7
3,462,681	+		LRK54_RS15715	0.57	+1.7
3,462,682	-		LRK54_RS15715	0.57	-3.1
3,462,705	+		LRK54_RS15715	0.59	+1.4
3,462,705	+		LRK54_RS15715	0.59	-1.6
3,462,705	+		LRK54_RS15715	0.59	-1.5
3,462,705	+		LRK54_RS15715	0.59	+1.4
3,462,705	+		LRK54_RS15715	0.59	-0.2
3,462,705	+		LRK54_RS15715	0.59	+1.2
3,462,705	+		LRK54_RS15715	0.59	-0.5
3,462,705	+		LRK54_RS15715	0.59	-0.8
3,462,705	+		LRK54_RS15715	0.59	+0.8
3,462,705	+		LRK54_RS15715	0.59	+1.7
3,462,706	-		LRK54_RS15715	0.59	-0.2
3,462,706	-		LRK54_RS15715	0.59	-0.8
3,462,706	-		LRK54_RS15715	0.59	-1.4
3,462,706	-		LRK54_RS15715	0.59	+0.9
3,462,706	-		LRK54_RS15715	0.59	-1.0
3,462,795	+		LRK54_RS15715	0.65	-2.4
3,462,796	-		LRK54_RS15715	0.65	-1.5