Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24665

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
6,015,093	+		CA265_RS24660	0.56	-1.8
6,015,142	-		CA265_RS24660	0.59	-0.0
6,015,239	+		CA265_RS24660	0.65	+0.1
6,015,239	+		CA265_RS24660	0.65	+0.1
6,015,239	+		CA265_RS24660	0.65	-0.6
6,015,240	-		CA265_RS24660	0.65	-1.1
6,015,275	+		CA265_RS24660	0.67	+1.3
6,015,276	-		CA265_RS24660	0.67	-1.4
6,015,317	-		CA265_RS24660	0.69	-1.0
6,015,366	+		CA265_RS24660	0.72	+1.7
6,015,366	+		CA265_RS24660	0.72	+0.8
6,015,425	+		CA265_RS24660	0.75	+0.1
6,015,447	+		CA265_RS24660	0.76	+0.7
6,015,537	+		CA265_RS24660	0.82	-0.4
6,015,538	-		CA265_RS24660	0.82	+0.3
6,015,538	-		CA265_RS24660	0.82	-0.4
6,015,621	-		CA265_RS24660	0.86	-0.5
6,015,676	+		CA265_RS24660	0.89	+0.2
6,015,677	-		CA265_RS24660	0.90	-1.5
6,015,776	-				-0.9
6,015,791	-				-0.6
6,015,919	-				-0.7
6,015,923	-				-1.2
6,015,993	+				-1.0
6,016,105	+				+0.4
6,016,105	+				-1.1
6,016,105	+				-0.5
6,016,106	-				-1.8
6,016,106	-				-0.9
6,016,146	+		CA265_RS24665	0.12	-0.7
6,016,247	+		CA265_RS24665	0.19	-1.7
6,016,247	+		CA265_RS24665	0.19	-2.7
6,016,247	+		CA265_RS24665	0.19	-0.5
6,016,248	-		CA265_RS24665	0.19	-0.9
6,016,248	-		CA265_RS24665	0.19	-1.5
6,016,393	+		CA265_RS24665	0.30	-0.6
6,016,394	-		CA265_RS24665	0.30	-1.8
6,016,439	-		CA265_RS24665	0.33	+0.1
6,016,486	+		CA265_RS24665	0.36	-0.5
6,016,497	+		CA265_RS24665	0.37	-0.4
6,016,561	+		CA265_RS24665	0.42	-1.2
6,016,562	-		CA265_RS24665	0.42	-0.5
6,016,564	-		CA265_RS24665	0.42	-1.4
6,016,590	+		CA265_RS24665	0.44	-1.2
6,016,607	-		CA265_RS24665	0.45	-2.3
6,016,788	-		CA265_RS24665	0.58	-1.5
6,016,788	-		CA265_RS24665	0.58	-1.6
6,016,887	-		CA265_RS24665	0.65	-1.5
6,016,896	+		CA265_RS24665	0.66	-0.4
6,016,896	+		CA265_RS24665	0.66	-0.5
6,016,897	-		CA265_RS24665	0.66	-1.1
6,016,969	-		CA265_RS24665	0.71	-1.6
6,017,034	-		CA265_RS24665	0.76	-0.8
6,017,034	-		CA265_RS24665	0.76	-1.2
6,017,034	-		CA265_RS24665	0.76	-0.1
6,017,042	-		CA265_RS24665	0.77	-0.8
6,017,056	+		CA265_RS24665	0.78	-0.2
6,017,057	-		CA265_RS24665	0.78	-1.5
6,017,119	+		CA265_RS24665	0.82	+0.7
6,017,146	+		CA265_RS24665	0.84	-0.8
6,017,233	-				-1.0
6,017,286	+				-0.0
6,017,286	+				-1.3
6,017,287	-				-1.1
6,017,287	-				-1.6
6,017,350	+				-0.2
6,017,360	+				+0.2
6,017,360	+				-0.1
6,017,361	-				-2.1
6,017,364	+				+0.7
6,017,365	-				-1.0
6,017,467	+				-0.5
6,017,581	-				-0.9
6,017,611	+				+0.2
6,017,612	-				-1.0
6,017,662	+				-0.4
6,017,666	+				+0.4
6,017,666	+				-0.2
6,017,718	+				+0.1
6,017,760	-				+0.3
6,017,786	+				-0.1
6,017,817	-		CA265_RS24670	0.11	+0.2
6,017,822	+		CA265_RS24670	0.12	-0.4
6,017,917	+		CA265_RS24670	0.17	+0.4
6,017,917	+		CA265_RS24670	0.17	+0.5
6,017,934	-		CA265_RS24670	0.17	-0.3
6,017,953	-		CA265_RS24670	0.18	-0.5
6,017,959	+		CA265_RS24670	0.19	-0.7
6,017,960	-		CA265_RS24670	0.19	+0.4
6,017,979	-		CA265_RS24670	0.20	+0.7
6,018,044	-		CA265_RS24670	0.23	+0.2
6,018,071	+		CA265_RS24670	0.25	+0.2
6,018,102	+		CA265_RS24670	0.26	-0.3
6,018,102	+		CA265_RS24670	0.26	-0.2
6,018,103	-		CA265_RS24670	0.26	-0.0
6,018,107	+		CA265_RS24670	0.26	-0.8
6,018,107	+		CA265_RS24670	0.26	+0.6
6,018,136	+		CA265_RS24670	0.28	+0.5
6,018,137	-		CA265_RS24670	0.28	-0.8
6,018,137	-		CA265_RS24670	0.28	-0.6
6,018,137	-		CA265_RS24670	0.28	-0.4
6,018,178	-		CA265_RS24670	0.30	+1.5
6,018,230	-		CA265_RS24670	0.33	+0.4
6,018,230	-		CA265_RS24670	0.33	-0.0
6,018,320	+		CA265_RS24670	0.37	+0.8
6,018,334	-		CA265_RS24670	0.38	-2.4