Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24170

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
5,885,969	-		CA265_RS24160	0.74	+0.5
5,886,001	+		CA265_RS24160	0.78	-0.2
5,886,002	-		CA265_RS24160	0.78	-2.5
5,886,165	+				-0.9
5,886,169	+				+0.8
5,886,274	-		CA265_RS24165	0.15	+0.5
5,886,311	-		CA265_RS24165	0.21	-0.5
5,886,338	+		CA265_RS24165	0.25	-0.0
5,886,349	-		CA265_RS24165	0.27	-1.7
5,886,447	-		CA265_RS24165	0.42	+0.5
5,886,459	-		CA265_RS24165	0.43	-0.0
5,886,497	-		CA265_RS24165	0.49	-0.0
5,886,505	+		CA265_RS24165	0.50	+0.3
5,886,506	-		CA265_RS24165	0.51	+1.0
5,886,507	+		CA265_RS24165	0.51	+0.1
5,886,536	+		CA265_RS24165	0.55	+0.7
5,886,579	+		CA265_RS24165	0.62	+0.8
5,886,580	-		CA265_RS24165	0.62	+0.7
5,886,597	+		CA265_RS24165	0.65	+0.7
5,886,652	+		CA265_RS24165	0.73	+0.2
5,886,652	+		CA265_RS24165	0.73	+1.3
5,886,653	-		CA265_RS24165	0.73	+0.8
5,886,735	+		CA265_RS24165	0.86	-1.3
5,886,776	+				+1.1
5,886,918	-				+1.8
5,886,971	-				+1.6
5,886,987	-				+2.0
5,886,987	-				+0.5
5,886,995	-				+1.3
5,886,995	-				+1.4
5,887,022	-				+1.1
5,887,022	-				+1.7
5,887,050	-				+1.5
5,887,170	-		CA265_RS24170	0.19	+0.8
5,887,264	+		CA265_RS24170	0.27	+0.5
5,887,335	-		CA265_RS24170	0.33	+1.9
5,887,375	-		CA265_RS24170	0.36	+1.5
5,887,475	+		CA265_RS24170	0.44	+1.7
5,887,475	+				+1.3
5,887,476	-		CA265_RS24170	0.45	-0.0
5,887,479	+		CA265_RS24170	0.45	+1.7
5,887,479	+		CA265_RS24170	0.45	-1.3
5,887,479	+		CA265_RS24170	0.45	-0.1
5,887,480	-		CA265_RS24170	0.45	-1.1
5,887,612	+		CA265_RS24170	0.56	+1.2
5,887,712	+		CA265_RS24170	0.64	+1.5
5,887,790	+		CA265_RS24170	0.71	+2.0
5,887,821	-		CA265_RS24170	0.73	+0.9
5,887,835	-		CA265_RS24170	0.74	+1.5
5,887,835	-		CA265_RS24170	0.74	+1.6
5,887,841	-		CA265_RS24170	0.75	+0.5
5,887,871	+		CA265_RS24170	0.77	+1.5
5,887,937	-		CA265_RS24170	0.83	+3.8
5,887,938	+		CA265_RS24170	0.83	+1.3
5,887,939	-		CA265_RS24170	0.83	+1.2
5,887,939	-		CA265_RS24170	0.83	+0.9
5,887,939	-		CA265_RS24170	0.83	+0.7
5,887,939	-		CA265_RS24170	0.83	+2.8
5,887,946	-		CA265_RS24170	0.83	+1.4
5,887,959	-		CA265_RS24170	0.85	+1.7
5,888,008	-		CA265_RS24170	0.89	+3.7
5,888,038	+				+1.6
5,888,039	-				-1.4
5,888,039	-				+1.2
5,888,044	-				+2.3
5,888,048	-				+1.6
5,888,056	+				+1.3
5,888,108	+				+1.4
5,888,138	-				+1.5
5,888,143	-				+0.8
5,888,207	+				+0.8
5,888,331	+				+1.3
5,888,332	-				+2.0
5,888,337	+				+1.5
5,888,337	+				+1.3
5,888,342	+				+1.1
5,888,527	-				+1.3
5,888,630	-				+0.3
5,888,635	+				+1.7
5,888,636	-				+0.3
5,888,636	-				+1.4
5,888,636	-				+0.3
5,888,640	+				+1.0
5,888,700	-				+3.1
5,888,740	+		CA265_RS24175	0.13	+2.3
5,888,740	+		CA265_RS24175	0.13	+1.7
5,888,742	+		CA265_RS24175	0.13	+1.2
5,888,742	+		CA265_RS24175	0.13	+1.3
5,888,743	-		CA265_RS24175	0.13	+2.7
5,888,767	-		CA265_RS24175	0.16	+4.0
5,888,820	-		CA265_RS24175	0.23	+2.0
5,888,866	-		CA265_RS24175	0.28	+2.2
5,888,898	-		CA265_RS24175	0.32	+3.2
5,888,899	+		CA265_RS24175	0.32	+1.5
5,888,943	+		CA265_RS24175	0.38	+1.7
5,889,117	+		CA265_RS24175	0.59	+0.9
5,889,136	+		CA265_RS24175	0.62	+2.5