Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21255

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
5,237,769	-		CA265_RS21250	0.40	+0.2
5,237,772	+		CA265_RS21250	0.40	+3.5
5,237,773	-		CA265_RS21250	0.41	-0.6
5,237,792	+		CA265_RS21250	0.42	+4.6
5,237,793	-		CA265_RS21250	0.42	+1.7
5,237,827	-		CA265_RS21250	0.44	+0.5
5,237,887	-		CA265_RS21250	0.49	-0.2
5,237,931	+		CA265_RS21250	0.52	+4.7
5,237,936	+		CA265_RS21250	0.52	+4.3
5,237,959	-		CA265_RS21250	0.54	+0.4
5,237,998	-		CA265_RS21250	0.57	+1.7
5,237,998	-		CA265_RS21250	0.57	-1.9
5,238,062	-		CA265_RS21250	0.61	+0.1
5,238,062	-		CA265_RS21250	0.61	+1.1
5,238,080	-		CA265_RS21250	0.63	+0.9
5,238,090	+		CA265_RS21250	0.63	+4.5
5,238,099	+		CA265_RS21250	0.64	+4.3
5,238,100	-		CA265_RS21250	0.64	-0.7
5,238,129	-		CA265_RS21250	0.66	-0.1
5,238,129	-		CA265_RS21250	0.66	+0.3
5,238,139	+		CA265_RS21250	0.67	+4.3
5,238,139	+		CA265_RS21250	0.67	+5.0
5,238,192	+		CA265_RS21250	0.71	+5.0
5,238,200	+		CA265_RS21250	0.71	+5.1
5,238,210	-		CA265_RS21250	0.72	-1.0
5,238,219	-		CA265_RS21250	0.73	+0.4
5,238,257	+		CA265_RS21250	0.76	+4.8
5,238,304	+		CA265_RS21250	0.79	+5.2
5,238,341	-		CA265_RS21250	0.82	+0.5
5,238,425	-		CA265_RS21250	0.88	+0.3
5,238,466	-				-0.3
5,238,476	+				+4.7
5,238,523	+				+5.0
5,238,568	+				+4.8
5,238,569	-				+0.2
5,238,591	+				+5.4
5,238,668	-				-0.1
5,238,727	+				+3.0
5,238,728	-				-0.4
5,238,728	-				-0.4
5,238,827	+		CA265_RS21255	0.15	+2.7
5,238,915	-		CA265_RS21255	0.23	-0.2
5,238,983	+		CA265_RS21255	0.28	+4.2
5,239,006	+		CA265_RS21255	0.30	+4.1
5,239,006	+		CA265_RS21255	0.30	+4.2
5,239,019	+		CA265_RS21255	0.31	+3.7
5,239,024	+		CA265_RS21255	0.32	+4.2
5,239,060	-		CA265_RS21255	0.35	+0.7
5,239,091	+		CA265_RS21255	0.37	+3.8
5,239,096	-		CA265_RS21255	0.38	-0.1
5,239,096	-		CA265_RS21255	0.38	-0.3
5,239,137	-		CA265_RS21255	0.41	-0.2
5,239,160	+		CA265_RS21255	0.43	+3.0
5,239,160	+		CA265_RS21255	0.43	+3.5
5,239,182	-		CA265_RS21255	0.45	-0.3
5,239,201	+		CA265_RS21255	0.47	+3.9
5,239,202	-		CA265_RS21255	0.47	-0.2
5,239,275	+		CA265_RS21255	0.53	+3.7
5,239,323	+		CA265_RS21255	0.57	+2.0
5,239,359	+		CA265_RS21255	0.60	+4.7
5,239,360	-		CA265_RS21255	0.60	+0.9
5,239,376	+		CA265_RS21255	0.62	+4.2
5,239,376	+		CA265_RS21255	0.62	+3.9
5,239,377	-		CA265_RS21255	0.62	+1.0
5,239,534	+		CA265_RS21255	0.75	+5.0
5,239,536	+		CA265_RS21255	0.75	+5.7
5,239,537	-		CA265_RS21255	0.75	+0.6
5,239,568	+		CA265_RS21255	0.78	+5.6
5,239,649	-		CA265_RS21255	0.85	+0.1
5,239,653	+		CA265_RS21255	0.85	+5.5
5,239,653	+		CA265_RS21255	0.85	+5.5
5,239,667	+		CA265_RS21255	0.86	+5.3
5,239,667	+		CA265_RS21255	0.86	+5.8
5,239,668	-		CA265_RS21255	0.86	+0.0
5,239,668	-		CA265_RS21255	0.86	-0.5
5,239,707	+		CA265_RS21255	0.90	+5.9
5,239,735	+				+5.5
5,239,769	+				+5.4
5,239,793	+				+5.3
5,239,963	-		CA265_RS21260	0.11	+0.2
5,240,127	-		CA265_RS21260	0.22	+0.9
5,240,127	-		CA265_RS21260	0.22	-0.3
5,240,151	+		CA265_RS21260	0.23	+2.9
5,240,167	+		CA265_RS21260	0.24	+3.1
5,240,169	+		CA265_RS21260	0.24	+4.3
5,240,184	+		CA265_RS21260	0.25	+2.2
5,240,194	+		CA265_RS21260	0.26	+3.1
5,240,194	+		CA265_RS21260	0.26	+3.0
5,240,396	+		CA265_RS21260	0.39	+3.6
5,240,466	+		CA265_RS21260	0.43	+4.0
5,240,573	-		CA265_RS21260	0.50	+0.9
5,240,596	-		CA265_RS21260	0.52	+0.5
5,240,629	+		CA265_RS21260	0.54	+4.8
5,240,663	+		CA265_RS21260	0.56	+4.7
5,240,708	+		CA265_RS21260	0.59	+4.2
5,240,708	+		CA265_RS21260	0.59	+5.0
5,240,725	-		CA265_RS21260	0.60	-0.3
5,240,761	+		CA265_RS21260	0.62	+4.9
5,240,762	-		CA265_RS21260	0.62	-0.1
5,240,804	+		CA265_RS21260	0.65	+4.8
5,240,807	+		CA265_RS21260	0.65	+5.7
5,240,820	+		CA265_RS21260	0.66	+4.8