Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20005

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
4,945,906	+		CA265_RS20000	0.42	+1.3
4,945,907	-		CA265_RS20000	0.42	+0.3
4,945,922	+		CA265_RS20000	0.43	-1.6
4,945,954	+		CA265_RS20000	0.45	-0.4
4,945,998	-		CA265_RS20000	0.49	-1.6
4,946,213	-		CA265_RS20000	0.64	-1.1
4,946,220	+		CA265_RS20000	0.64	-0.2
4,946,279	-		CA265_RS20000	0.69	-1.2
4,946,288	-		CA265_RS20000	0.69	-2.2
4,946,341	+		CA265_RS20000	0.73	-0.9
4,946,386	+		CA265_RS20000	0.76	-0.4
4,946,386	+		CA265_RS20000	0.76	+1.1
4,946,390	+		CA265_RS20000	0.76	-0.8
4,946,416	+		CA265_RS20000	0.78	-0.2
4,946,424	+		CA265_RS20000	0.79	-0.5
4,946,431	-		CA265_RS20000	0.79	-0.0
4,946,465	-		CA265_RS20000	0.82	-0.6
4,946,489	-		CA265_RS20000	0.83	+0.1
4,946,489	-		CA265_RS20000	0.83	-0.0
4,946,529	-		CA265_RS20000	0.86	-1.5
4,946,535	+		CA265_RS20000	0.87	+0.1
4,946,607	-				-0.7
4,946,615	-				-0.5
4,946,629	+				-0.4
4,946,629	+				-0.1
4,946,630	-				-1.2
4,946,630	-				-1.7
4,946,634	-				-0.9
4,946,634	-				-1.5
4,946,704	+				-0.8
4,946,704	+				+0.4
4,946,708	+				-1.0
4,946,709	-				-0.4
4,946,741	+				-1.8
4,946,800	-				-0.3
4,946,811	-				-0.6
4,946,891	+				+0.6
4,946,992	-		CA265_RS20005	0.13	-1.5
4,947,009	+		CA265_RS20005	0.15	+1.1
4,947,009	+		CA265_RS20005	0.15	+0.2
4,947,130	+		CA265_RS20005	0.31	-0.8
4,947,168	+				+0.1
4,947,191	-		CA265_RS20005	0.39	-0.0
4,947,199	-		CA265_RS20005	0.40	-2.3
4,947,261	+		CA265_RS20005	0.48	-1.1
4,947,261	+		CA265_RS20005	0.48	-0.2
4,947,261	+		CA265_RS20005	0.48	-0.1
4,947,304	+		CA265_RS20005	0.53	-0.4
4,947,305	-		CA265_RS20005	0.53	-0.7
4,947,305	-		CA265_RS20005	0.53	-1.4
4,947,366	+		CA265_RS20005	0.61	-0.1
4,947,397	-		CA265_RS20005	0.65	-0.4
4,947,448	-		CA265_RS20005	0.72	-0.9
4,947,448	-		CA265_RS20005	0.72	-1.1
4,947,449	+		CA265_RS20005	0.72	-1.0
4,947,465	+		CA265_RS20005	0.74	-1.8
4,947,514	-		CA265_RS20005	0.80	-0.0
4,947,524	-		CA265_RS20005	0.81	-1.0
4,947,524	-		CA265_RS20005	0.81	-2.1
4,947,537	+		CA265_RS20005	0.83	-1.0
4,947,583	-		CA265_RS20005	0.89	-0.7
4,947,625	+				-0.1
4,947,669	+				+0.3
4,947,670	-				-2.2
4,947,708	+				+0.0
4,947,708	+				+0.0
4,947,710	+				+0.5
4,947,710	+				+0.3
4,947,711	-				-0.8
4,947,711	-				-0.9
4,947,711	-				-1.0
4,947,711	-				-0.6
4,947,711	-				-1.9
4,947,720	+		CA265_RS20010	0.11	+0.3
4,947,721	-		CA265_RS20010	0.11	-0.5
4,947,748	+		CA265_RS20010	0.18	-0.7
4,947,799	-		CA265_RS20010	0.30	-0.5
4,947,830	-		CA265_RS20010	0.37	+1.2
4,947,895	-		CA265_RS20010	0.53	-1.0
4,947,976	+		CA265_RS20010	0.72	-0.1
4,948,039	+		CA265_RS20010	0.87	-0.4
4,948,040	-		CA265_RS20010	0.87	-0.0
4,948,069	-				+0.3
4,948,147	-				-0.1
4,948,170	+				-0.1