Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19620

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
4,860,477	-				+1.5
4,860,484	-				+1.5
4,860,489	+				+1.0
4,860,489	+				+1.1
4,860,489	+				-0.4
4,860,490	-				+1.3
4,860,554	-		CA265_RS19615	0.11	-0.2
4,860,568	+		CA265_RS19615	0.13	-1.0
4,860,573	-		CA265_RS19615	0.14	+2.8
4,860,588	-		CA265_RS19615	0.16	+0.7
4,860,609	-		CA265_RS19615	0.19	+1.0
4,860,609	-		CA265_RS19615	0.19	+2.7
4,860,658	+		CA265_RS19615	0.27	-0.2
4,860,683	+		CA265_RS19615	0.30	+0.9
4,860,684	-		CA265_RS19615	0.31	+1.2
4,860,684	-		CA265_RS19615	0.31	+0.7
4,860,686	-		CA265_RS19615	0.31	+0.9
4,860,700	+		CA265_RS19615	0.33	+0.8
4,860,716	+		CA265_RS19615	0.35	+0.4
4,860,978	-		CA265_RS19615	0.74	+1.4
4,861,012	-		CA265_RS19615	0.79	+1.1
4,861,031	-		CA265_RS19615	0.82	+1.7
4,861,044	+		CA265_RS19615	0.84	-0.3
4,861,045	-		CA265_RS19615	0.84	+0.5
4,861,098	-				+0.3
4,861,098	-				+0.7
4,861,304	-				+0.8
4,861,354	-				+0.7
4,861,392	+				+1.0
4,861,392	+				-1.5
4,861,462	-				+1.3
4,861,498	-		CA265_RS19620	0.11	+3.2
4,861,504	+		CA265_RS19620	0.13	+0.4
4,861,504	+		CA265_RS19620	0.13	+1.2
4,861,562	-		CA265_RS19620	0.30	+3.0
4,861,580	-		CA265_RS19620	0.35	+2.7
4,861,589	-		CA265_RS19620	0.37	+2.4
4,861,607	-		CA265_RS19620	0.43	+1.9
4,861,616	-		CA265_RS19620	0.45	+2.5
4,861,619	-		CA265_RS19620	0.46	+3.1
4,861,627	+		CA265_RS19620	0.48	+0.9
4,861,825	-				+0.3
4,861,959	-				-4.0
4,862,004	+				-0.4
4,862,048	-				+2.0
4,862,073	+				+0.2
4,862,079	-				-2.1
4,862,090	+				-0.7
4,862,135	+				-0.6
4,862,174	+				+0.3
4,862,175	-				-0.8
4,862,175	-				-1.5
4,862,268	+		CA265_RS19625	0.16	+0.7
4,862,269	-		CA265_RS19625	0.16	-0.7
4,862,302	-		CA265_RS19625	0.20	-2.3
4,862,302	-		CA265_RS19625	0.20	+0.6
4,862,331	+		CA265_RS19625	0.23	-0.3
4,862,361	-		CA265_RS19625	0.27	-2.2
4,862,456	-		CA265_RS19625	0.38	-1.7
4,862,484	-		CA265_RS19625	0.41	-0.2
4,862,486	+		CA265_RS19625	0.41	+1.0
4,862,488	+		CA265_RS19625	0.42	+0.4
4,862,488	+		CA265_RS19625	0.42	-0.5
4,862,488	+		CA265_RS19625	0.42	+0.6
4,862,573	-		CA265_RS19625	0.51	-3.6
4,862,629	-		CA265_RS19625	0.58	-1.8
4,862,668	+		CA265_RS19625	0.62	+0.6
4,862,705	-		CA265_RS19625	0.67	-1.0
4,862,705	-		CA265_RS19625	0.67	-0.8
4,862,746	+		CA265_RS19625	0.72	+0.2
4,862,757	-		CA265_RS19625	0.73	-0.7
4,862,760	+		CA265_RS19625	0.73	+0.2
4,862,760	+		CA265_RS19625	0.73	-0.1