Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18230

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
4,544,195	-				-0.7
4,544,237	-				-1.4
4,544,257	-				-1.2
4,544,257	-				-1.1
4,544,257	-				+0.3
4,544,257	-				-1.0
4,544,257	-				+0.8
4,544,366	+				+0.0
4,544,371	+				+0.7
4,544,372	-				-1.1
4,544,379	+				+0.6
4,544,379	+				+0.5
4,544,380	-				+0.4
4,544,380	-				-0.3
4,544,411	-				-0.9
4,544,413	+				+0.5
4,544,413	+				-0.1
4,544,414	-				-1.1
4,544,415	+				+0.8
4,544,442	+				+2.4
4,544,443	-				+1.5
4,544,490	+		CA265_RS18225	0.10	+3.2
4,544,513	+		CA265_RS18225	0.14	+2.6
4,544,513	+		CA265_RS18225	0.14	+2.5
4,544,535	-		CA265_RS18225	0.17	+3.0
4,544,538	+		CA265_RS18225	0.17	+3.4
4,544,571	+		CA265_RS18225	0.22	+2.4
4,544,643	+		CA265_RS18225	0.33	+2.8
4,544,699	+		CA265_RS18225	0.41	+2.8
4,544,699	+		CA265_RS18225	0.41	+2.9
4,544,699	+		CA265_RS18225	0.41	+2.2
4,544,700	-		CA265_RS18225	0.41	+2.3
4,544,703	-		CA265_RS18225	0.41	+2.7
4,544,802	-		CA265_RS18225	0.56	+3.5
4,544,804	-		CA265_RS18225	0.56	+3.5
4,544,824	+		CA265_RS18225	0.59	+3.1
4,544,868	-		CA265_RS18225	0.65	+1.9
4,544,871	-		CA265_RS18225	0.66	+2.6
4,544,946	+		CA265_RS18225	0.77	+2.7
4,544,957	+		CA265_RS18225	0.78	+2.9
4,544,957	+		CA265_RS18225	0.78	+2.5
4,545,021	-		CA265_RS18225	0.87	+1.7
4,545,021	-		CA265_RS18225	0.87	+3.3
4,545,037	-		CA265_RS18225	0.90	+3.5
4,545,078	+				+3.2
4,545,112	-				+0.5
4,545,120	+				+2.9
4,545,173	+				+2.5
4,545,173	+				+1.8
4,545,194	+				+3.2
4,545,194	+				+2.3
4,545,196	+				+2.8
4,545,196	+				+2.8
4,545,196	+				+3.1
4,545,231	+				+3.5
4,545,323	-				-2.4
4,545,354	+		CA265_RS18230	0.10	+3.4
4,545,475	+		CA265_RS18230	0.17	+1.6
4,545,502	-		CA265_RS18230	0.19	-1.9
4,545,530	+		CA265_RS18230	0.21	+3.3
4,545,540	-		CA265_RS18230	0.21	-1.3
4,545,556	+		CA265_RS18230	0.22	+3.4
4,545,557	-		CA265_RS18230	0.22	-2.4
4,545,623	+		CA265_RS18230	0.26	+3.1
4,545,624	-		CA265_RS18230	0.26	-3.1
4,545,624	-		CA265_RS18230	0.26	-1.6
4,545,648	-		CA265_RS18230	0.28	-1.8
4,545,671	+		CA265_RS18230	0.29	+3.4
4,545,693	+		CA265_RS18230	0.30	+3.5
4,545,693	+		CA265_RS18230	0.30	+2.7
4,545,726	+		CA265_RS18230	0.32	+2.1
4,545,726	+		CA265_RS18230	0.32	+3.2
4,545,768	-		CA265_RS18230	0.35	-0.9
4,545,872	+		CA265_RS18230	0.41	+2.4
4,545,926	-		CA265_RS18230	0.44	-2.4
4,545,928	-		CA265_RS18230	0.44	-3.5
4,546,013	+		CA265_RS18230	0.49	+2.8
4,546,014	-		CA265_RS18230	0.49	-1.4
4,546,089	+		CA265_RS18230	0.54	+3.4
4,546,131	-		CA265_RS18230	0.56	-2.4
4,546,144	-		CA265_RS18230	0.57	-0.1
4,546,220	+		CA265_RS18230	0.62	+3.4
4,546,229	-		CA265_RS18230	0.62	-0.1
4,546,236	+		CA265_RS18230	0.63	+2.6
4,546,237	-		CA265_RS18230	0.63	-2.4
4,546,256	+		CA265_RS18230	0.64	+2.4
4,546,330	-		CA265_RS18230	0.68	-2.5
4,546,430	-		CA265_RS18230	0.74	-3.9
4,546,582	-		CA265_RS18230	0.83	-3.3
4,546,614	-		CA265_RS18230	0.85	-3.9
4,546,623	+		CA265_RS18230	0.86	+3.5
4,546,636	+		CA265_RS18230	0.87	+2.1
4,546,639	+		CA265_RS18230	0.87	+3.0
4,546,678	+		CA265_RS18230	0.89	+2.6
4,546,679	-		CA265_RS18230	0.89	-1.8
4,546,688	+		CA265_RS18230	0.90	+2.6
4,546,719	+				+3.0
4,546,720	-				-3.5
4,546,749	-				-1.0
4,546,751	-				-0.1
4,546,779	-				-3.9
4,546,909	+				+2.1
4,546,969	+				+3.3
4,546,974	-				-3.6
4,547,030	+				+2.0
4,547,114	+		CA265_RS18235	0.13	+2.9
4,547,155	+		CA265_RS18235	0.15	+2.9
4,547,155	+		CA265_RS18235	0.15	+2.5
4,547,155	+		CA265_RS18235	0.15	+2.6
4,547,156	-		CA265_RS18235	0.16	-2.8
4,547,205	-		CA265_RS18235	0.18	-1.5
4,547,217	+		CA265_RS18235	0.19	-2.6
4,547,282	+		CA265_RS18235	0.22	-0.1
4,547,285	-		CA265_RS18235	0.22	-2.0
4,547,356	-		CA265_RS18235	0.26	-2.0
4,547,413	+		CA265_RS18235	0.29	-0.8
4,547,413	+		CA265_RS18235	0.29	-1.1
4,547,428	+		CA265_RS18235	0.30	-0.6
4,547,435	+		CA265_RS18235	0.30	-0.2
4,547,446	+		CA265_RS18235	0.31	-0.3
4,547,502	-		CA265_RS18235	0.34	-2.9
4,547,502	-		CA265_RS18235	0.34	-2.2
4,547,504	-		CA265_RS18235	0.34	+0.3
4,547,534	+		CA265_RS18235	0.36	-0.1
4,547,535	-		CA265_RS18235	0.36	-2.5
4,547,535	-		CA265_RS18235	0.36	-3.4
4,547,557	-		CA265_RS18235	0.37	+0.3
4,547,593	+		CA265_RS18235	0.39	-0.0
4,547,678	+		CA265_RS18235	0.43	-2.1
4,547,679	-		CA265_RS18235	0.43	-3.3
4,547,714	+		CA265_RS18235	0.45	-1.6
4,547,714	+		CA265_RS18235	0.45	-1.1
4,547,718	+		CA265_RS18235	0.45	-1.7
4,547,718	+		CA265_RS18235	0.45	-0.7
4,547,723	-		CA265_RS18235	0.46	-1.7
4,547,723	-		CA265_RS18235	0.46	-3.9
4,547,837	-		CA265_RS18235	0.52	-3.7
4,547,850	-				+0.3