Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18190

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
4,535,874	+				+1.3
4,535,875	-				-0.6
4,536,050	-		CA265_RS18185	0.19	-1.8
4,536,062	-		CA265_RS18185	0.21	-1.1
4,536,083	+		CA265_RS18185	0.24	+1.9
4,536,182	+		CA265_RS18185	0.36	+0.4
4,536,311	-		CA265_RS18185	0.53	-0.2
4,536,311	-		CA265_RS18185	0.53	-0.4
4,536,357	-		CA265_RS18185	0.58	-0.7
4,536,377	-		CA265_RS18185	0.61	+0.6
4,536,377	-		CA265_RS18185	0.61	+0.8
4,536,435	-		CA265_RS18185	0.68	+1.3
4,536,483	-		CA265_RS18185	0.74	-0.1
4,536,649	-				+0.4
4,536,669	-				-1.0
4,536,682	-				+0.9
4,536,682	-				+0.7
4,536,696	+				-0.9
4,536,713	+				+0.7
4,536,739	-				-1.3
4,536,746	-				-0.5
4,536,919	+		CA265_RS18190	0.12	-0.1
4,536,920	-		CA265_RS18190	0.12	-1.7
4,536,957	-		CA265_RS18190	0.16	-1.1
4,536,960	+		CA265_RS18190	0.17	-1.7
4,537,006	+		CA265_RS18190	0.22	-0.5
4,537,007	-		CA265_RS18190	0.22	-1.2
4,537,104	+		CA265_RS18190	0.33	-0.4
4,537,144	+		CA265_RS18190	0.38	-1.1
4,537,144	+		CA265_RS18190	0.38	+0.1
4,537,254	+		CA265_RS18190	0.50	-2.3
4,537,255	-		CA265_RS18190	0.50	-1.8
4,537,261	+		CA265_RS18190	0.51	-0.7
4,537,313	-		CA265_RS18190	0.57	-3.0
4,537,331	+		CA265_RS18190	0.59	-1.3
4,537,331	+		CA265_RS18190	0.59	-1.6
4,537,331	+		CA265_RS18190	0.59	-2.0
4,537,331	+		CA265_RS18190	0.59	-1.7
4,537,339	-		CA265_RS18190	0.60	-2.0
4,537,353	-		CA265_RS18190	0.62	-0.2
4,537,353	-		CA265_RS18190	0.62	-0.1
4,537,353	-		CA265_RS18190	0.62	-2.2
4,537,456	-		CA265_RS18190	0.73	-1.3
4,537,456	-		CA265_RS18190	0.73	-0.4
4,537,689	-				-2.9
4,537,712	+				+0.6
4,537,820	-				-0.8
4,537,820	-				+1.6
4,537,895	-		CA265_RS18195	0.13	+0.6
4,537,926	-		CA265_RS18195	0.18	-0.0
4,537,963	+		CA265_RS18195	0.24	+0.1
4,538,018	+		CA265_RS18195	0.33	+0.1
4,538,115	-		CA265_RS18195	0.49	+0.7
4,538,165	-		CA265_RS18195	0.58	+0.5
4,538,177	-		CA265_RS18195	0.60	+1.5
4,538,190	+		CA265_RS18195	0.62	-0.7
4,538,253	-		CA265_RS18195	0.72	-1.0
4,538,265	-		CA265_RS18195	0.74	+0.3
4,538,392	-				+0.2
4,538,467	-				-0.2
4,538,496	-				-0.7
4,538,499	-				-2.3
4,538,549	-				-0.5
4,538,551	-				+0.3
4,538,593	+				+0.2
4,538,595	+				-0.3
4,538,601	+				+1.0
4,538,601	+				+0.5
4,538,601	+				-0.3
4,538,602	-				+0.4
4,538,610	-				+0.2
4,538,627	+				-0.1
4,538,627	+				-0.2
4,538,648	-				-2.2
4,538,651	-				-0.9
4,538,657	+				-0.7
4,538,657	+				+0.1