Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17685

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
4,410,352	-		CA265_RS17675	0.83	-0.1
4,410,363	+		CA265_RS17675	0.84	-1.3
4,410,659	+				+1.1
4,410,798	+				-2.2
4,410,809	+				-2.1
4,410,812	+				-2.8
4,410,845	+				-3.2
4,410,846	-				-2.5
4,410,863	-				-4.2
4,410,898	+		CA265_RS17680	0.16	-4.0
4,411,056	-		CA265_RS17680	0.48	-2.8
4,411,056	-		CA265_RS17680	0.48	-3.1
4,411,076	-		CA265_RS17680	0.52	-2.5
4,411,111	+		CA265_RS17680	0.60	-2.8
4,411,112	-		CA265_RS17680	0.60	-2.9
4,411,120	-		CA265_RS17680	0.61	-2.2
4,411,120	-		CA265_RS17680	0.61	-3.9
4,411,154	+		CA265_RS17680	0.68	-2.4
4,411,316	-				-0.9
4,411,319	+				-4.1
4,411,320	-				-4.0
4,411,323	-				-2.5
4,411,324	+				-0.2
4,411,324	+				-4.1
4,411,325	-				-1.1
4,411,325	-				-3.3
4,411,329	-				-0.5
4,411,333	-				-4.6
4,411,347	+				-3.5
4,411,348	-				-0.2
4,411,378	+		CA265_RS17685	0.13	-3.2
4,411,432	+		CA265_RS17685	0.27	-3.1
4,411,432	+		CA265_RS17685	0.27	-0.7
4,411,433	-		CA265_RS17685	0.27	-1.5
4,411,433	-		CA265_RS17685	0.27	-2.2
4,411,434	+		CA265_RS17685	0.27	-2.2
4,411,435	-		CA265_RS17685	0.28	-1.4
4,411,435	-		CA265_RS17685	0.28	+2.1
4,411,435	-		CA265_RS17685	0.28	-1.0
4,411,451	-		CA265_RS17685	0.32	-2.6
4,411,497	-		CA265_RS17685	0.44	-0.4
4,411,516	+		CA265_RS17685	0.49	-2.4
4,411,517	-		CA265_RS17685	0.50	-0.8
4,411,527	-		CA265_RS17685	0.52	-1.9
4,411,560	-		CA265_RS17685	0.61	-3.7
4,411,598	-		CA265_RS17685	0.71	-2.7
4,411,676	-				-1.4
4,411,679	+				-2.8
4,411,680	-				-1.7
4,411,684	-				-1.2
4,411,719	-				-0.6
4,411,822	+				-2.5
4,411,865	-				-1.5
4,411,867	+				-0.7
4,411,917	+				-1.2
4,411,955	-				+0.6
4,412,019	+				-2.2
4,412,076	+				-2.4
4,412,076	+				+0.3
4,412,077	-				-0.3
4,412,077	-				-2.1
4,412,082	+				-2.7
4,412,136	+				-2.4
4,412,179	+		CA265_RS17690	0.12	-3.9
4,412,189	-				+0.3
4,412,209	+		CA265_RS17690	0.16	-2.0
4,412,209	+		CA265_RS17690	0.16	-0.9
4,412,217	+		CA265_RS17690	0.17	-2.7
4,412,217	+		CA265_RS17690	0.17	-3.8
4,412,217	+		CA265_RS17690	0.17	-1.9
4,412,260	+		CA265_RS17690	0.23	+1.3
4,412,261	-		CA265_RS17690	0.23	-2.1
4,412,381	+		CA265_RS17690	0.40	-3.1
4,412,381	+		CA265_RS17690	0.40	-2.9
4,412,381	+		CA265_RS17690	0.40	-3.3
4,412,382	-		CA265_RS17690	0.40	-2.3
4,412,395	+		CA265_RS17690	0.41	-1.8
4,412,498	+		CA265_RS17690	0.55	-3.1
4,412,499	-		CA265_RS17690	0.55	-2.9
4,412,503	+		CA265_RS17690	0.56	-2.5
4,412,516	-		CA265_RS17690	0.58	-2.4
4,412,516	-		CA265_RS17690	0.58	-3.0
4,412,519	+		CA265_RS17690	0.58	-3.6
4,412,520	-		CA265_RS17690	0.58	-3.4
4,412,539	+		CA265_RS17690	0.61	-2.8
4,412,551	-		CA265_RS17690	0.62	-2.4
4,412,588	-		CA265_RS17690	0.67	-2.7
4,412,616	-		CA265_RS17690	0.71	-1.4
4,412,616	-		CA265_RS17690	0.71	-3.1
4,412,662	+		CA265_RS17690	0.77	-0.9