Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17210

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
4,295,106	-				+0.2
4,295,113	+				-4.2
4,295,140	-				-0.4
4,295,170	-				-0.4
4,295,318	+				+0.5
4,295,323	+				-1.2
4,295,324	-				-1.0
4,295,325	+				-1.9
4,295,325	+				-1.2
4,295,325	+				-0.9
4,295,325	+				-1.0
4,295,326	-				-2.4
4,295,327	+				-1.1
4,295,385	+				-2.6
4,295,385	+				-2.7
4,295,426	-		CA265_RS17205	0.15	-1.4
4,295,426	-		CA265_RS17205	0.15	-2.1
4,295,426	-		CA265_RS17205	0.15	-1.9
4,295,426	-				+1.9
4,295,455	+		CA265_RS17205	0.19	-3.6
4,295,456	-		CA265_RS17205	0.20	+0.2
4,295,473	-		CA265_RS17205	0.22	-1.5
4,295,474	+		CA265_RS17205	0.22	-2.4
4,295,474	+		CA265_RS17205	0.22	-3.5
4,295,475	-		CA265_RS17205	0.22	-0.9
4,295,480	+		CA265_RS17205	0.23	-2.5
4,295,588	+		CA265_RS17205	0.38	-2.2
4,295,634	+		CA265_RS17205	0.44	-2.0
4,295,666	+		CA265_RS17205	0.48	-2.4
4,295,680	+		CA265_RS17205	0.50	-1.2
4,295,680	+		CA265_RS17205	0.50	-4.1
4,295,714	+		CA265_RS17205	0.55	-3.8
4,295,749	+		CA265_RS17205	0.60	-5.0
4,295,885	+		CA265_RS17205	0.78	-2.8
4,295,888	-		CA265_RS17205	0.79	-2.0
4,295,888	-		CA265_RS17205	0.79	-1.2
4,295,902	+		CA265_RS17205	0.80	-3.8
4,295,911	+		CA265_RS17205	0.82	-3.8
4,295,911	+		CA265_RS17205	0.82	-2.8
4,295,955	+		CA265_RS17205	0.88	-4.1
4,295,997	-				-1.5
4,295,997	-				-1.1
4,296,027	+				-2.0
4,296,030	-				-1.7
4,296,036	+				-2.6
4,296,037	-				-2.5
4,296,045	+				-1.9
4,296,059	+				-2.2
4,296,064	+				-1.4
4,296,065	-				-3.0
4,296,112	-				-4.4
4,296,116	+				-1.1
4,296,116	+				-4.2
4,296,116	+				-3.5
4,296,117	-				-1.3
4,296,132	+		CA265_RS17210	0.11	-5.1
4,296,153	+		CA265_RS17210	0.14	-2.8
4,296,162	-		CA265_RS17210	0.15	-1.8
4,296,213	-		CA265_RS17210	0.21	-2.4
4,296,262	+		CA265_RS17210	0.26	-2.3
4,296,262	+		CA265_RS17210	0.26	-3.3
4,296,263	-		CA265_RS17210	0.26	-2.0
4,296,265	-		CA265_RS17210	0.27	-2.1
4,296,265	-		CA265_RS17210	0.27	+0.1
4,296,292	-		CA265_RS17210	0.30	+0.3
4,296,389	+		CA265_RS17210	0.41	-3.0
4,296,401	+		CA265_RS17210	0.43	-0.1
4,296,426	-		CA265_RS17210	0.45	-1.8
4,296,486	-		CA265_RS17210	0.53	-1.4
4,296,486	-		CA265_RS17210	0.53	-1.7
4,296,526	+		CA265_RS17210	0.57	-1.2
4,296,565	-		CA265_RS17210	0.62	-1.8
4,296,565	-		CA265_RS17210	0.62	-1.6
4,296,584	-		CA265_RS17210	0.64	-3.6
4,296,584	-		CA265_RS17210	0.64	-0.9
4,296,617	+		CA265_RS17210	0.68	-1.4
4,296,643	-		CA265_RS17210	0.71	-2.6
4,296,800	+		CA265_RS17210	0.89	-2.2
4,296,801	-		CA265_RS17210	0.89	-2.8
4,296,817	-				+0.9
4,296,821	+				-3.3
4,296,822	-				-1.2
4,296,840	+				-3.3
4,296,874	-				-1.4
4,296,889	+				+0.6
4,296,912	+				-1.6
4,296,913	-				-1.8
4,296,926	+				-3.0
4,297,039	-		CA265_RS17215	0.13	+1.2
4,297,062	-		CA265_RS17215	0.15	-3.5
4,297,064	+		CA265_RS17215	0.16	-3.3
4,297,180	+		CA265_RS17215	0.26	-1.1
4,297,224	+		CA265_RS17215	0.30	-2.7
4,297,225	-		CA265_RS17215	0.30	-1.4
4,297,225	-		CA265_RS17215	0.30	-3.9
4,297,227	-		CA265_RS17215	0.30	-1.1
4,297,235	+		CA265_RS17215	0.31	-2.4
4,297,248	+		CA265_RS17215	0.32	-2.6
4,297,298	-		CA265_RS17215	0.37	-4.0
4,297,316	+		CA265_RS17215	0.38	-2.9
4,297,379	-		CA265_RS17215	0.44	-3.2
4,297,401	+		CA265_RS17215	0.46	-1.4
4,297,402	-		CA265_RS17215	0.46	-2.9
4,297,402	-		CA265_RS17215	0.46	+0.1
4,297,404	+		CA265_RS17215	0.46	-2.2
4,297,407	+		CA265_RS17215	0.46	+0.7
4,297,415	-		CA265_RS17215	0.47	-2.2
4,297,435	-		CA265_RS17215	0.49	-0.8
4,297,457	-		CA265_RS17215	0.51	-0.2
4,297,475	+		CA265_RS17215	0.52	-4.3
4,297,517	+		CA265_RS17215	0.56	-1.9
4,297,526	+		CA265_RS17215	0.57	-4.0
4,297,526	+		CA265_RS17215	0.57	-1.4
4,297,527	-		CA265_RS17215	0.57	-1.1
4,297,547	+		CA265_RS17215	0.59	-2.8
4,297,547	+		CA265_RS17215	0.59	-4.0
4,297,612	-		CA265_RS17215	0.65	-1.7
4,297,618	-		CA265_RS17215	0.65	-1.4
4,297,714	+		CA265_RS17215	0.74	-2.5
4,297,722	-		CA265_RS17215	0.75	-1.6
4,297,746	-		CA265_RS17215	0.77	-0.5
4,297,755	+		CA265_RS17215	0.78	-1.5
4,297,795	-		CA265_RS17215	0.81	-3.8
4,297,795	-		CA265_RS17215	0.81	-1.4
4,297,839	-		CA265_RS17215	0.85	-1.8
4,297,866	+		CA265_RS17215	0.88	-2.7
4,297,866	+		CA265_RS17215	0.88	-4.0
4,297,867	-		CA265_RS17215	0.88	-2.8