Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15625

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,933,250	+		CA265_RS15620	0.63	+0.8
3,933,251	-		CA265_RS15620	0.64	+0.2
3,933,252	+		CA265_RS15620	0.64	-0.2
3,933,276	-		CA265_RS15620	0.64	-0.9
3,933,322	+		CA265_RS15620	0.66	+0.7
3,933,365	-		CA265_RS15620	0.68	-0.4
3,933,397	+		CA265_RS15620	0.69	+0.0
3,933,399	+		CA265_RS15620	0.69	-0.4
3,933,399	+		CA265_RS15620	0.69	+0.7
3,933,400	-		CA265_RS15620	0.69	-0.9
3,933,481	+		CA265_RS15620	0.72	+0.5
3,933,553	+		CA265_RS15620	0.75	-0.3
3,933,580	+		CA265_RS15620	0.76	-0.4
3,933,625	-		CA265_RS15620	0.78	+0.4
3,933,650	+		CA265_RS15620	0.78	+1.3
3,933,650	+		CA265_RS15620	0.78	+0.9
3,933,651	-		CA265_RS15620	0.78	-0.7
3,933,743	+		CA265_RS15620	0.82	+1.0
3,933,930	+		CA265_RS15620	0.89	-0.3
3,934,003	+				+0.6
3,934,029	-				+0.1
3,934,049	+				+0.5
3,934,049	+				+1.8
3,934,050	-				-0.5
3,934,050	-				-0.1
3,934,097	+				+1.2
3,934,200	+				-0.0
3,934,202	+				-0.2
3,934,203	-				+1.2
3,934,226	+				-0.5
3,934,229	+				-0.6
3,934,301	+				-1.0
3,934,301	+				-0.6
3,934,301	+				-0.1
3,934,346	+				+0.5
3,934,378	+		CA265_RS15625	0.10	+0.1
3,934,379	-		CA265_RS15625	0.10	-1.0
3,934,426	+		CA265_RS15625	0.14	-0.1
3,934,540	+		CA265_RS15625	0.22	-0.5
3,934,544	+		CA265_RS15625	0.22	+0.8
3,934,578	-		CA265_RS15625	0.24	-0.3
3,934,634	+		CA265_RS15625	0.28	-0.3
3,934,635	-		CA265_RS15625	0.28	-0.4
3,934,829	+		CA265_RS15625	0.42	-0.2
3,934,862	-		CA265_RS15625	0.44	+0.2
3,934,862	-		CA265_RS15625	0.44	-0.8
3,934,862	-		CA265_RS15625	0.44	-2.8
3,934,908	-		CA265_RS15625	0.47	-0.7
3,934,908	-		CA265_RS15625	0.47	-1.0
3,934,919	+		CA265_RS15625	0.48	+1.0
3,934,937	+		CA265_RS15625	0.49	+0.0
3,934,938	-		CA265_RS15625	0.50	+0.1
3,934,977	+		CA265_RS15625	0.52	-0.2
3,934,989	-		CA265_RS15625	0.53	-0.4
3,935,013	+				+2.1
3,935,020	+		CA265_RS15625	0.55	-0.9
3,935,058	+		CA265_RS15625	0.58	+1.1
3,935,059	-		CA265_RS15625	0.58	+0.1
3,935,085	+		CA265_RS15625	0.60	+0.8
3,935,085	+		CA265_RS15625	0.60	-0.4
3,935,103	+		CA265_RS15625	0.61	-0.5
3,935,104	-		CA265_RS15625	0.61	-0.1
3,935,178	+		CA265_RS15625	0.66	+0.1
3,935,230	+		CA265_RS15625	0.70	-0.6
3,935,230	+		CA265_RS15625	0.70	+0.5
3,935,230	+		CA265_RS15625	0.70	-0.7
3,935,230	+		CA265_RS15625	0.70	+0.2
3,935,231	-		CA265_RS15625	0.70	-0.4
3,935,231	-		CA265_RS15625	0.70	+0.3
3,935,400	+		CA265_RS15625	0.82	-0.3
3,935,401	-		CA265_RS15625	0.82	+0.1
3,935,410	+		CA265_RS15625	0.83	+0.1
3,935,476	-		CA265_RS15625	0.87	-0.1
3,935,581	+				-0.4
3,935,582	-				-0.5
3,935,660	+				-1.7
3,935,660	+				-2.2
3,935,705	+				+0.0
3,935,726	-				-1.2
3,935,726	-				+0.1
3,935,769	+				-0.6
3,935,783	+				-1.3
3,935,841	-				+0.0
3,935,843	-				-0.2
3,935,843	-				-0.6
3,935,843	-				-0.2
3,935,855	+				+0.5
3,935,855	+				+0.4
3,935,857	+				+1.1
3,935,857	+				-1.1
3,935,858	-				+1.6
3,935,878	-				-1.3
3,935,886	-				-1.1
3,935,918	+		CA265_RS15630	0.12	+1.0
3,936,003	-		CA265_RS15630	0.17	-0.3
3,936,008	+		CA265_RS15630	0.17	-0.5
3,936,009	-		CA265_RS15630	0.17	-0.4
3,936,074	+		CA265_RS15630	0.21	-2.7
3,936,074	+		CA265_RS15630	0.21	-0.2
3,936,074	+		CA265_RS15630	0.21	+0.0
3,936,075	-		CA265_RS15630	0.21	+0.1
3,936,078	-		CA265_RS15630	0.22	-0.3
3,936,093	-		CA265_RS15630	0.23	-0.8
3,936,123	+		CA265_RS15630	0.24	+0.1
3,936,128	+		CA265_RS15630	0.25	-0.3
3,936,129	-		CA265_RS15630	0.25	-0.2
3,936,131	-		CA265_RS15630	0.25	+1.1
3,936,204	+		CA265_RS15630	0.29	+1.1
3,936,205	-		CA265_RS15630	0.29	-0.3
3,936,297	-		CA265_RS15630	0.35	-1.0
3,936,398	+		CA265_RS15630	0.41	-0.5
3,936,416	+		CA265_RS15630	0.42	-0.6
3,936,416	+		CA265_RS15630	0.42	-0.0
3,936,417	-		CA265_RS15630	0.42	-0.6
3,936,456	-		CA265_RS15630	0.45	-1.2
3,936,477	+		CA265_RS15630	0.46	-0.3
3,936,477	+		CA265_RS15630	0.46	+0.1
3,936,526	+		CA265_RS15630	0.49	+1.1
3,936,554	+		CA265_RS15630	0.51	-1.2
3,936,598	+		CA265_RS15630	0.53	-0.4
3,936,599	-		CA265_RS15630	0.54	-0.6
3,936,599	-		CA265_RS15630	0.54	-0.0
3,936,635	-		CA265_RS15630	0.56	-0.6