Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15575

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,916,057	+				+0.2
3,916,060	+				-0.7
3,916,060	+				+0.5
3,916,060	+				-0.9
3,916,061	-				-0.1
3,916,067	-				-0.2
3,916,109	-				-0.8
3,916,112	+				-0.9
3,916,113	-				+1.7
3,916,189	+		CA265_RS15570	0.18	-0.9
3,916,200	+		CA265_RS15570	0.19	+0.1
3,916,200	+		CA265_RS15570	0.19	-0.6
3,916,201	-		CA265_RS15570	0.19	+1.2
3,916,205	-		CA265_RS15570	0.19	+0.1
3,916,274	+		CA265_RS15570	0.27	-0.8
3,916,283	+		CA265_RS15570	0.28	-0.2
3,916,301	+		CA265_RS15570	0.30	+0.6
3,916,422	-		CA265_RS15570	0.43	-0.3
3,916,446	-		CA265_RS15570	0.46	-0.3
3,916,478	+		CA265_RS15570	0.49	+0.0
3,916,478	+		CA265_RS15570	0.49	+0.2
3,916,482	-		CA265_RS15570	0.50	-0.9
3,916,487	+		CA265_RS15570	0.50	-0.6
3,916,488	-		CA265_RS15570	0.50	-0.1
3,916,503	-		CA265_RS15570	0.52	-1.2
3,916,554	+		CA265_RS15570	0.57	-0.4
3,916,594	+		CA265_RS15570	0.62	-0.2
3,916,598	+		CA265_RS15570	0.62	-0.2
3,916,646	-		CA265_RS15570	0.67	-0.8
3,916,655	+		CA265_RS15570	0.68	-0.5
3,916,661	+		CA265_RS15570	0.69	-0.4
3,916,668	-		CA265_RS15570	0.70	+0.6
3,916,766	+		CA265_RS15570	0.80	-0.2
3,916,863	-				+0.1
3,916,911	-				+0.3
3,916,931	-				-0.3
3,916,945	-				+1.6
3,916,981	+				-0.2
3,916,981	+				-0.3
3,916,982	-				-0.2
3,916,982	-				+0.8
3,917,037	-				-0.6
3,917,083	+				+0.2
3,917,138	+				-0.1
3,917,139	-				+1.3
3,917,168	-		CA265_RS15575	0.11	+0.1
3,917,189	+		CA265_RS15575	0.12	+0.0
3,917,190	-		CA265_RS15575	0.12	-0.5
3,917,219	-		CA265_RS15575	0.14	+0.6
3,917,325	+		CA265_RS15575	0.20	-0.0
3,917,326	-		CA265_RS15575	0.20	+0.7
3,917,326	-		CA265_RS15575	0.20	+0.3
3,917,326	-		CA265_RS15575	0.20	-0.5
3,917,331	+		CA265_RS15575	0.20	-0.5
3,917,331	+		CA265_RS15575	0.20	+0.2
3,917,386	+		CA265_RS15575	0.23	+0.2
3,917,386	+		CA265_RS15575	0.23	+0.4
3,917,386	+		CA265_RS15575	0.23	-0.1
3,917,391	-		CA265_RS15575	0.24	-0.8
3,917,405	-		CA265_RS15575	0.24	+0.2
3,917,425	+		CA265_RS15575	0.26	+0.3
3,917,476	+		CA265_RS15575	0.28	-0.5
3,917,559	+		CA265_RS15575	0.33	+0.6
3,917,560	-		CA265_RS15575	0.33	-0.6
3,917,593	+		CA265_RS15575	0.35	-0.2
3,917,594	-		CA265_RS15575	0.35	-1.2
3,917,668	-		CA265_RS15575	0.39	+0.9
3,917,693	+		CA265_RS15575	0.41	-0.2
3,917,710	+		CA265_RS15575	0.42	-0.4
3,917,768	-		CA265_RS15575	0.45	+0.6
3,917,828	-		CA265_RS15575	0.48	-0.2
3,917,828	-		CA265_RS15575	0.48	-0.3
3,917,868	+		CA265_RS15575	0.51	+0.5
3,917,900	+		CA265_RS15575	0.52	-0.3
3,917,922	-		CA265_RS15575	0.54	-0.5
3,917,938	-		CA265_RS15575	0.55	+0.6
3,917,943	-		CA265_RS15575	0.55	+1.7
3,917,949	-		CA265_RS15575	0.55	+1.5
3,918,000	+		CA265_RS15575	0.58	+2.1
3,918,000	+		CA265_RS15575	0.58	-0.4
3,918,001	-		CA265_RS15575	0.58	-1.0
3,918,001	-		CA265_RS15575	0.58	+0.8
3,918,064	-		CA265_RS15575	0.62	+1.2
3,918,205	+		CA265_RS15575	0.70	+0.3
3,918,267	-		CA265_RS15575	0.73	-0.2
3,918,282	-		CA265_RS15575	0.74	+0.3
3,918,282	-		CA265_RS15575	0.74	+0.7
3,918,296	-		CA265_RS15575	0.75	+0.8
3,918,369	-		CA265_RS15575	0.79	+1.3
3,918,372	-		CA265_RS15575	0.79	+0.3
3,918,487	+		CA265_RS15575	0.86	+0.5
3,918,488	-		CA265_RS15575	0.86	-0.1
3,918,523	+		CA265_RS15575	0.88	+0.3
3,918,524	-		CA265_RS15575	0.88	+0.2
3,918,524	-		CA265_RS15575	0.88	+1.9
3,918,524	-		CA265_RS15575	0.88	+0.7
3,918,592	+				+0.8
3,918,594	+				+0.8
3,918,594	+				+0.1
3,918,595	-				-0.7
3,918,595	-				+0.8
3,918,598	+				-1.6
3,918,683	+				+0.3
3,918,683	+				-0.2
3,918,683	+				-0.2
3,918,720	+				-0.4
3,918,722	+				+0.7
3,918,772	+				+0.6
3,918,805	-				-1.2
3,919,146	+				+1.2
3,919,172	+				-0.2
3,919,205	-				-1.7
3,919,245	+				-0.0
3,919,254	-				+0.3
3,919,258	+				-0.7
3,919,258	+				-0.5
3,919,258	+				+0.5
3,919,260	+				+0.4
3,919,260	+				+1.5
3,919,260	+				-0.8
3,919,274	-				-1.4
3,919,282	+				-0.1
3,919,320	+				-0.3
3,919,339	+		CA265_RS15580	0.12	-1.1
3,919,340	-		CA265_RS15580	0.12	+1.3
3,919,401	+		CA265_RS15580	0.20	+0.3
3,919,527	+		CA265_RS15580	0.37	+0.9
3,919,550	+		CA265_RS15580	0.40	+1.1
3,919,550	+		CA265_RS15580	0.40	-1.1
3,919,575	+		CA265_RS15580	0.43	-0.4
3,919,606	-		CA265_RS15580	0.47	+0.0
3,919,658	+		CA265_RS15580	0.54	+0.5
3,919,662	+		CA265_RS15580	0.54	+0.3
3,919,665	-		CA265_RS15580	0.55	-0.8