Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14060

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,536,092	+				+0.8
3,536,094	+				-1.2
3,536,095	-				+0.5
3,536,095	-				-0.9
3,536,095	-				-0.8
3,536,099	-				+0.9
3,536,099	-				-0.1
3,536,102	+				+0.2
3,536,103	-				-0.6
3,536,180	+				+0.8
3,536,180	+				-0.5
3,536,267	+				-0.8
3,536,342	+				-0.7
3,536,343	-				+0.3
3,536,370	+				-0.8
3,536,506	+		CA265_RS14055	0.14	-0.2
3,536,511	+		CA265_RS14055	0.15	-0.1
3,536,511	+		CA265_RS14055	0.15	+0.5
3,536,512	-		CA265_RS14055	0.15	+0.1
3,536,652	+		CA265_RS14055	0.42	-0.4
3,536,653	-		CA265_RS14055	0.42	-1.9
3,536,653	-		CA265_RS14055	0.42	-0.8
3,536,686	+		CA265_RS14055	0.49	-0.4
3,536,709	+		CA265_RS14055	0.53	-0.6
3,536,710	-		CA265_RS14055	0.53	-1.5
3,536,765	+		CA265_RS14055	0.64	-0.4
3,536,766	-		CA265_RS14055	0.64	+0.2
3,536,766	-		CA265_RS14055	0.64	+0.9
3,536,768	+		CA265_RS14055	0.64	+1.0
3,536,769	-		CA265_RS14055	0.65	+0.9
3,536,769	-				+2.1
3,536,771	-		CA265_RS14055	0.65	+0.0
3,536,880	+		CA265_RS14055	0.86	-0.8
3,536,945	-				-0.3
3,536,963	+				-1.2
3,536,964	-				+2.1
3,537,034	-				-0.2
3,537,034	-				-0.2
3,537,034	-				-0.8
3,537,044	+				-0.1
3,537,098	+				-0.4
3,537,121	+				-0.1
3,537,122	-				-0.1
3,537,198	-		CA265_RS14060	0.15	+0.8
3,537,220	+		CA265_RS14060	0.17	+0.0
3,537,221	-		CA265_RS14060	0.17	-0.3
3,537,221	-		CA265_RS14060	0.17	+1.2
3,537,264	+		CA265_RS14060	0.20	-1.5
3,537,314	-		CA265_RS14060	0.25	-0.3
3,537,314	-		CA265_RS14060	0.25	-1.2
3,537,333	-		CA265_RS14060	0.26	+0.7
3,537,354	-		CA265_RS14060	0.28	+0.5
3,537,354	-		CA265_RS14060	0.28	-0.5
3,537,379	+		CA265_RS14060	0.30	-0.4
3,537,379	+		CA265_RS14060	0.30	-0.5
3,537,389	+		CA265_RS14060	0.31	-0.9
3,537,389	+		CA265_RS14060	0.31	-1.3
3,537,402	-		CA265_RS14060	0.32	-1.4
3,537,483	+		CA265_RS14060	0.39	-0.0
3,537,515	+		CA265_RS14060	0.42	-0.8
3,537,581	-		CA265_RS14060	0.47	+0.9
3,537,581	-		CA265_RS14060	0.47	-1.4
3,537,585	-		CA265_RS14060	0.47	-0.7
3,537,604	+		CA265_RS14060	0.49	+0.6
3,537,633	+		CA265_RS14060	0.52	-0.4
3,537,634	-		CA265_RS14060	0.52	+0.7
3,537,677	+		CA265_RS14060	0.55	-0.2
3,537,677	+		CA265_RS14060	0.55	-0.1
3,537,692	-		CA265_RS14060	0.57	-0.4
3,537,718	-		CA265_RS14060	0.59	-0.1
3,537,908	+		CA265_RS14060	0.75	-0.4
3,537,908	+		CA265_RS14060	0.75	-0.1
3,537,917	+		CA265_RS14060	0.76	-0.4
3,537,917	+		CA265_RS14060	0.76	-0.8
3,537,918	-		CA265_RS14060	0.76	-1.1
3,537,918	-		CA265_RS14060	0.76	-0.1
3,537,918	-		CA265_RS14060	0.76	-0.2
3,537,919	+		CA265_RS14060	0.76	-1.2
3,537,919	+		CA265_RS14060	0.76	-0.3
3,537,919	+		CA265_RS14060	0.76	-0.9
3,537,920	-		CA265_RS14060	0.76	-1.8
3,537,920	-		CA265_RS14060	0.76	-0.7
3,537,920	-		CA265_RS14060	0.76	+0.9
3,537,923	+		CA265_RS14060	0.76	-0.6
3,538,037	-		CA265_RS14060	0.86	-0.1
3,538,080	-		CA265_RS14060	0.89	-0.1
3,538,171	+				+0.4
3,538,181	+				-0.7
3,538,232	+				+0.0
3,538,236	-				+0.5
3,538,302	-				-0.2
3,538,385	-				+0.7
3,538,428	-				-0.8
3,538,449	+		CA265_RS14065	0.13	-1.3
3,538,449	+		CA265_RS14065	0.13	-0.9
3,538,453	+		CA265_RS14065	0.14	+0.3
3,538,454	-		CA265_RS14065	0.14	-1.0
3,538,458	+		CA265_RS14065	0.15	-1.0
3,538,504	+		CA265_RS14065	0.23	-1.0
3,538,537	+		CA265_RS14065	0.29	-0.6
3,538,537	+		CA265_RS14065	0.29	-1.0
3,538,542	-		CA265_RS14065	0.29	-0.4
3,538,664	-		CA265_RS14065	0.51	-0.7
3,538,739	+		CA265_RS14065	0.64	-0.1
3,538,740	-		CA265_RS14065	0.65	+0.1
3,538,816	+		CA265_RS14065	0.78	-1.2
3,538,867	-		CA265_RS14065	0.87	-0.1
3,538,922	-				-3.3
3,538,962	-				+0.1
3,538,967	-				+0.6
3,539,038	-				+0.8
3,539,141	-				+0.7
3,539,145	-				+0.5