Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13850

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,475,662	-		CA265_RS13845	0.37	+0.0
3,475,731	-		CA265_RS13845	0.42	-0.4
3,475,734	+		CA265_RS13845	0.42	-1.0
3,475,818	-		CA265_RS13845	0.47	+0.5
3,475,863	+		CA265_RS13845	0.50	-1.2
3,475,863	+		CA265_RS13845	0.50	-0.6
3,475,864	-		CA265_RS13845	0.50	+0.1
3,475,994	+		CA265_RS13845	0.59	-0.1
3,476,017	+				+0.1
3,476,056	+		CA265_RS13845	0.63	+0.4
3,476,056	+		CA265_RS13845	0.63	+0.5
3,476,057	-		CA265_RS13845	0.63	-0.2
3,476,057	-		CA265_RS13845	0.63	-0.2
3,476,086	-		CA265_RS13845	0.65	+0.8
3,476,133	-		CA265_RS13845	0.68	-0.1
3,476,197	+		CA265_RS13845	0.72	-0.9
3,476,198	-		CA265_RS13845	0.72	-0.2
3,476,213	-		CA265_RS13845	0.73	+0.9
3,476,244	-		CA265_RS13845	0.75	-0.1
3,476,248	-		CA265_RS13845	0.75	+0.6
3,476,289	+		CA265_RS13845	0.78	-0.1
3,476,428	+		CA265_RS13845	0.87	-0.2
3,476,431	+		CA265_RS13845	0.87	+0.5
3,476,432	-		CA265_RS13845	0.87	+0.0
3,476,507	-				-0.9
3,476,507	-				+1.2
3,476,507	-				+1.4
3,476,507	-				-0.3
3,476,507	-				+0.7
3,476,507	-				+0.3
3,476,611	+				-0.5
3,476,655	-				+0.2
3,476,655	-				-0.2
3,476,690	-				+0.1
3,476,717	-				-0.1
3,476,760	-				+0.3
3,476,760	-				-1.0
3,476,825	-				+0.8
3,476,891	+		CA265_RS13850	0.13	+1.1
3,476,903	+		CA265_RS13850	0.14	-0.2
3,477,022	+		CA265_RS13850	0.20	+1.9
3,477,107	+		CA265_RS13850	0.24	-0.4
3,477,181	-		CA265_RS13850	0.28	+1.7
3,477,183	+		CA265_RS13850	0.28	-0.5
3,477,184	-		CA265_RS13850	0.28	+0.5
3,477,207	-		CA265_RS13850	0.30	-0.1
3,477,255	+		CA265_RS13850	0.32	+0.3
3,477,255	+		CA265_RS13850	0.32	-0.1
3,477,263	+		CA265_RS13850	0.32	+0.0
3,477,381	-		CA265_RS13850	0.39	+0.1
3,477,473	+		CA265_RS13850	0.43	+0.3
3,477,474	-		CA265_RS13850	0.43	+0.5
3,477,482	+		CA265_RS13850	0.44	-0.3
3,477,483	-		CA265_RS13850	0.44	+0.3
3,477,490	+		CA265_RS13850	0.44	-1.4
3,477,623	+		CA265_RS13850	0.51	-0.1
3,477,695	-		CA265_RS13850	0.55	+0.3
3,477,771	+		CA265_RS13850	0.59	+1.0
3,477,771	+		CA265_RS13850	0.59	+0.0
3,477,897	+		CA265_RS13850	0.65	-0.8
3,477,900	+		CA265_RS13850	0.65	-1.3
3,477,901	-		CA265_RS13850	0.65	+0.5
3,477,937	+		CA265_RS13850	0.67	+0.8
3,477,937	+		CA265_RS13850	0.67	-0.1
3,477,992	+		CA265_RS13850	0.70	-0.2
3,477,998	-		CA265_RS13850	0.70	+0.3
3,478,100	+		CA265_RS13850	0.76	-1.1
3,478,100	+		CA265_RS13850	0.76	-0.7
3,478,305	-		CA265_RS13850	0.86	-0.1
3,478,371	+		CA265_RS13850	0.90	+0.0
3,478,453	+				-0.9
3,478,457	+				-0.2
3,478,505	+				+0.3
3,478,506	-				-1.0
3,478,549	+				-1.7
3,478,550	-				-0.5
3,478,559	-				+1.0
3,478,559	-				-1.2
3,478,592	-				+0.1
3,478,621	+				+1.0
3,478,622	-				+0.9
3,478,629	-				-0.7
3,478,629	-				-1.0
3,478,655	-				+0.4
3,478,677	+		CA265_RS13855	0.11	+0.3
3,478,677	+		CA265_RS13855	0.11	+1.1
3,478,678	-		CA265_RS13855	0.11	+0.3
3,478,705	+		CA265_RS13855	0.14	+0.5
3,478,705	+		CA265_RS13855	0.14	+0.2
3,478,710	+		CA265_RS13855	0.14	-1.1
3,478,738	-		CA265_RS13855	0.17	-0.7
3,478,758	+		CA265_RS13855	0.19	-0.0
3,478,759	-		CA265_RS13855	0.20	+0.7
3,478,769	+		CA265_RS13855	0.21	+0.3
3,478,770	-		CA265_RS13855	0.21	+0.5
3,478,824	-		CA265_RS13855	0.26	+0.1
3,478,917	-		CA265_RS13855	0.36	+0.4
3,478,973	-		CA265_RS13855	0.42	-0.5
3,479,025	+		CA265_RS13855	0.48	-0.4
3,479,073	+		CA265_RS13855	0.53	-0.7
3,479,074	-		CA265_RS13855	0.53	+0.4
3,479,077	+		CA265_RS13855	0.54	-0.8
3,479,077	+		CA265_RS13855	0.54	+0.4
3,479,081	-		CA265_RS13855	0.54	-0.3
3,479,157	+		CA265_RS13855	0.62	+0.0
3,479,230	-		CA265_RS13855	0.70	-1.8
3,479,230	-		CA265_RS13855	0.70	+0.3
3,479,256	-		CA265_RS13855	0.73	-0.3
3,479,266	+		CA265_RS13855	0.74	-0.6
3,479,324	+		CA265_RS13855	0.80	-0.7
3,479,337	+		CA265_RS13855	0.81	-0.5
3,479,351	-		CA265_RS13855	0.83	-0.5
3,479,377	+		CA265_RS13855	0.86	-0.7
3,479,378	-		CA265_RS13855	0.86	+1.2
3,479,510	-				+0.5
3,479,513	+				+0.5