Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13775

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,449,827	+		CA265_RS13770	0.74	-0.2
3,449,891	-		CA265_RS13770	0.76	-0.6
3,449,895	-		CA265_RS13770	0.76	+0.2
3,450,038	-		CA265_RS13770	0.81	-0.3
3,450,055	-		CA265_RS13770	0.82	-0.4
3,450,120	+		CA265_RS13770	0.84	-0.6
3,450,126	-		CA265_RS13770	0.84	-0.4
3,450,264	-		CA265_RS13770	0.89	+0.7
3,450,340	-				-0.2
3,450,348	+				-0.8
3,450,349	-				-0.6
3,450,404	-				-0.0
3,450,404	-				+0.3
3,450,444	+				+0.7
3,450,493	-				-0.5
3,450,558	+				-0.2
3,450,559	-				+0.4
3,450,594	-				+0.1
3,450,618	-				-0.1
3,450,658	+				-0.0
3,450,659	-				+1.0
3,450,663	-				+0.5
3,450,669	-				+0.2
3,450,707	-				+0.3
3,450,804	+				+0.1
3,450,851	-				+0.6
3,450,851	-				+1.8
3,450,930	-				-0.4
3,450,930	-				-0.4
3,450,982	-				-1.3
3,450,982	-				+0.0
3,450,983	+				+0.3
3,450,983	+				+0.2
3,450,983	+				+0.0
3,450,984	-				-0.4
3,450,988	-				+1.2
3,451,047	+		CA265_RS13775	0.13	+0.2
3,451,052	-		CA265_RS13775	0.14	+2.2
3,451,052	-		CA265_RS13775	0.14	-0.2
3,451,119	+		CA265_RS13775	0.18	+0.4
3,451,120	-		CA265_RS13775	0.18	-0.1
3,451,120	-		CA265_RS13775	0.18	+0.9
3,451,149	+		CA265_RS13775	0.20	-0.8
3,451,181	+		CA265_RS13775	0.21	+0.6
3,451,185	+		CA265_RS13775	0.22	+2.0
3,451,482	+		CA265_RS13775	0.39	-0.3
3,451,489	-		CA265_RS13775	0.40	+2.2
3,451,505	+		CA265_RS13775	0.41	+0.1
3,451,560	-		CA265_RS13775	0.44	-0.7
3,451,570	+		CA265_RS13775	0.45	-0.5
3,451,570	+		CA265_RS13775	0.45	-1.2
3,451,571	-		CA265_RS13775	0.45	-0.4
3,451,571	-		CA265_RS13775	0.45	+0.6
3,451,608	+		CA265_RS13775	0.47	-1.1
3,451,608	+		CA265_RS13775	0.47	-0.2
3,451,608	+		CA265_RS13775	0.47	-0.3
3,451,608	+		CA265_RS13775	0.47	+1.3
3,451,609	-		CA265_RS13775	0.47	-0.0
3,451,609	-		CA265_RS13775	0.47	-0.2
3,451,645	+		CA265_RS13775	0.49	+0.2
3,451,646	-		CA265_RS13775	0.49	-1.1
3,451,722	-		CA265_RS13775	0.54	-1.5
3,451,753	-		CA265_RS13775	0.56	-0.2
3,451,753	-		CA265_RS13775	0.56	+0.3
3,451,782	-		CA265_RS13775	0.57	+1.6
3,451,826	+		CA265_RS13775	0.60	+0.3
3,451,863	+		CA265_RS13775	0.62	+1.8
3,451,872	+		CA265_RS13775	0.63	+1.6
3,451,909	-		CA265_RS13775	0.65	+1.0
3,451,917	+		CA265_RS13775	0.66	+1.0
3,451,917	+		CA265_RS13775	0.66	-0.0
3,451,918	-		CA265_RS13775	0.66	-0.0
3,451,934	-		CA265_RS13775	0.67	+0.1
3,452,027	-		CA265_RS13775	0.72	-0.2
3,452,027	-		CA265_RS13775	0.72	-0.0
3,452,092	-		CA265_RS13775	0.76	+0.2
3,452,092	-		CA265_RS13775	0.76	+1.3
3,452,106	-		CA265_RS13775	0.77	-0.1
3,452,183	+		CA265_RS13775	0.81	+0.6
3,452,183	+		CA265_RS13775	0.81	+0.3
3,452,254	+		CA265_RS13775	0.86	+0.0
3,452,393	+				+1.0
3,452,493	+				-0.0
3,452,543	-				-0.8
3,452,580	-				+0.3
3,452,580	-				-0.8
3,452,580	-				-0.9
3,452,580	-				-1.7
3,452,581	+				-0.6
3,452,581	+				+0.1
3,452,582	-				+0.6
3,452,582	-				+0.0
3,452,582	-				+0.3
3,452,620	+				-0.5
3,452,621	-				+0.2
3,452,631	-				-0.5
3,452,657	+				-0.1
3,452,657	+				-0.7
3,452,657	+				+0.5
3,452,659	+				-1.0
3,452,659	+				+0.4
3,452,695	+				-0.4
3,452,703	+				+0.2
3,452,704	-				-1.0
3,452,731	+				-0.1
3,452,830	+				-0.3
3,452,975	+				-0.4
3,452,980	+		CA265_RS13780	0.10	-0.4
3,453,029	-		CA265_RS13780	0.14	-0.6
3,453,031	+		CA265_RS13780	0.14	-0.3
3,453,032	-		CA265_RS13780	0.14	-1.1
3,453,043	+		CA265_RS13780	0.15	-0.8
3,453,059	-		CA265_RS13780	0.17	-0.2
3,453,178	-		CA265_RS13780	0.26	-0.3
3,453,217	+		CA265_RS13780	0.29	-0.4
3,453,217	+		CA265_RS13780	0.29	-0.4
3,453,217	+		CA265_RS13780	0.29	-1.2
3,453,217	+		CA265_RS13780	0.29	-0.1
3,453,225	-		CA265_RS13780	0.30	+0.3
3,453,245	-		CA265_RS13780	0.31	+1.2
3,453,304	+		CA265_RS13780	0.36	-0.4
3,453,304	+		CA265_RS13780	0.36	-0.7
3,453,308	-		CA265_RS13780	0.36	-0.4
3,453,382	+		CA265_RS13780	0.42	+1.0
3,453,382	+		CA265_RS13780	0.42	-0.0
3,453,386	-		CA265_RS13780	0.43	-0.0
3,453,412	+		CA265_RS13780	0.45	-0.3
3,453,412	+		CA265_RS13780	0.45	-0.2
3,453,412	+		CA265_RS13780	0.45	-1.8
3,453,456	-		CA265_RS13780	0.48	-0.4
3,453,456	-		CA265_RS13780	0.48	-0.1
3,453,456	-		CA265_RS13780	0.48	+2.2
3,453,456	-		CA265_RS13780	0.48	-1.0
3,453,457	+		CA265_RS13780	0.48	-0.9
3,453,458	-		CA265_RS13780	0.48	+0.2