Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13750

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,437,846	+		CA265_RS13740	0.51	+4.8
3,437,848	-		CA265_RS13740	0.52	-1.7
3,437,888	+		CA265_RS13740	0.55	+5.2
3,437,889	-		CA265_RS13740	0.55	-0.8
3,437,889	-		CA265_RS13740	0.55	+0.4
3,437,916	-		CA265_RS13740	0.58	+0.0
3,437,947	-		CA265_RS13740	0.61	+0.0
3,437,954	+		CA265_RS13740	0.62	+5.5
3,437,954	+		CA265_RS13740	0.62	+5.3
3,437,963	+		CA265_RS13740	0.63	+5.4
3,437,963	+		CA265_RS13740	0.63	+6.0
3,437,964	-		CA265_RS13740	0.63	+0.7
3,437,998	+		CA265_RS13740	0.66	+5.3
3,438,054	-		CA265_RS13740	0.71	+2.2
3,438,155	+		CA265_RS13740	0.81	+5.4
3,438,221	+		CA265_RS13740	0.87	+5.9
3,438,221	+		CA265_RS13740	0.87	+6.5
3,438,222	-		CA265_RS13740	0.87	-0.9
3,438,222	-		CA265_RS13740	0.87	+0.4
3,438,257	+				+6.2
3,438,261	+				+6.2
3,438,279	-				-0.2
3,438,347	+				+6.2
3,438,348	-				+0.2
3,438,348	-				+0.2
3,438,348	-				-0.3
3,438,412	+				+1.4
3,438,469	-		CA265_RS13745	0.20	-0.5
3,438,492	-		CA265_RS13745	0.25	-0.6
3,438,523	+		CA265_RS13745	0.32	+3.5
3,438,523	+		CA265_RS13745	0.32	+3.8
3,438,609	+		CA265_RS13745	0.51	+3.2
3,438,611	+		CA265_RS13745	0.51	+4.1
3,438,616	+		CA265_RS13745	0.52	+4.1
3,438,647	+		CA265_RS13745	0.59	+2.4
3,438,668	+		CA265_RS13745	0.64	+3.3
3,438,704	-		CA265_RS13745	0.72	-1.2
3,438,704	-		CA265_RS13745	0.72	+1.2
3,438,704	-		CA265_RS13745	0.72	+0.0
3,438,724	+		CA265_RS13745	0.76	+1.3
3,438,725	-		CA265_RS13745	0.76	-1.8
3,438,725	-		CA265_RS13745	0.76	-2.6
3,438,725	-		CA265_RS13745	0.76	-0.5
3,438,753	-		CA265_RS13745	0.83	+0.1
3,438,770	-		CA265_RS13745	0.86	-1.3
3,438,909	-				-0.2
3,438,983	-				+0.5
3,438,983	-				+0.0
3,438,998	-				+0.9
3,439,015	+		CA265_RS13750	0.10	+0.2
3,439,019	-		CA265_RS13750	0.11	-0.0
3,439,312	-		CA265_RS13750	0.28	-1.5
3,439,509	+		CA265_RS13750	0.40	+2.1
3,439,585	+		CA265_RS13750	0.45	+2.1
3,439,662	+		CA265_RS13750	0.50	+1.2
3,439,719	+		CA265_RS13750	0.53	+3.5
3,439,719	+		CA265_RS13750	0.53	+2.8
3,439,719	+		CA265_RS13750	0.53	+3.6
3,439,731	-		CA265_RS13750	0.54	+0.3
3,439,764	+		CA265_RS13750	0.56	+4.6
3,439,765	-		CA265_RS13750	0.56	+0.7
3,439,834	+		CA265_RS13750	0.60	+4.2
3,439,899	+		CA265_RS13750	0.64	+3.6
3,439,901	+		CA265_RS13750	0.64	+3.8
3,439,901	+		CA265_RS13750	0.64	+3.2
3,439,932	+		CA265_RS13750	0.66	+3.7
3,439,942	-		CA265_RS13750	0.67	-1.0
3,439,986	-		CA265_RS13750	0.69	+0.8
3,440,079	-		CA265_RS13750	0.75	+0.5
3,440,089	+		CA265_RS13750	0.76	+5.1
3,440,089	-		CA265_RS13750	0.76	-0.2
3,440,090	-		CA265_RS13750	0.76	-1.4
3,440,206	-		CA265_RS13750	0.83	+1.7
3,440,208	-		CA265_RS13750	0.83	+1.2
3,440,228	+		CA265_RS13750	0.84	+4.7
3,440,228	+		CA265_RS13750	0.84	+5.6
3,440,244	+		CA265_RS13750	0.85	+5.7
3,440,245	-		CA265_RS13750	0.85	+0.4
3,440,247	-		CA265_RS13750	0.85	+0.2
3,440,258	-		CA265_RS13750	0.86	+2.2
3,440,283	+		CA265_RS13750	0.87	+5.6
3,440,284	-		CA265_RS13750	0.87	+0.0
3,440,314	+		CA265_RS13750	0.89	+5.2
3,440,382	+				+6.4
3,440,383	-				-1.0
3,440,450	+				+5.7
3,440,453	-				-1.2
3,440,475	+				+5.0
3,440,476	-				+0.9
3,440,527	+				+1.9
3,440,620	+				-1.5
3,440,620	+				-0.3
3,440,620	+				-0.9
3,440,621	-				+0.5
3,440,640	-				-1.2
3,440,640	-				+0.5
3,440,720	-				-0.1
3,440,728	+				-0.5
3,440,791	+				-1.4
3,440,810	-				+0.6
3,440,832	-				-0.6
3,440,867	+				-0.6
3,440,915	+				-1.3
3,440,933	-				+0.7
3,440,939	+				+0.2
3,440,945	+				-3.0
3,440,948	+				-1.2
3,440,949	-				-0.6
3,441,011	-				-0.3
3,441,078	-				+0.1
3,441,153	+				-0.7
3,441,225	-				-0.4
3,441,256	-				-0.3
3,441,300	+				-0.2
3,441,339	+				+0.9
3,441,390	+				-0.4
3,441,445	+				-1.0
3,441,486	-		CA265_RS13755	0.11	-0.9
3,441,486	-		CA265_RS13755	0.11	+0.7