Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13675

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,420,370	-		CA265_RS13670	0.73	+0.3
3,420,390	+		CA265_RS13670	0.73	-0.4
3,420,444	+		CA265_RS13670	0.75	-0.3
3,420,444	+		CA265_RS13670	0.75	+0.9
3,420,445	-		CA265_RS13670	0.75	-0.1
3,420,445	-		CA265_RS13670	0.75	+0.9
3,420,522	-		CA265_RS13670	0.78	+0.4
3,420,570	-		CA265_RS13670	0.79	+0.9
3,420,600	-		CA265_RS13670	0.80	+0.2
3,420,620	+		CA265_RS13670	0.81	+0.1
3,420,631	+		CA265_RS13670	0.82	-0.2
3,420,654	-		CA265_RS13670	0.82	-0.2
3,420,665	+		CA265_RS13670	0.83	+1.0
3,420,709	-		CA265_RS13670	0.84	-0.6
3,421,060	-				-0.1
3,421,102	-				-0.1
3,421,114	-				+0.6
3,421,307	+				+0.3
3,421,335	-				+0.2
3,421,335	-				+0.8
3,421,338	-				+0.7
3,421,355	-				+0.5
3,421,366	+				-0.0
3,421,367	-				-0.3
3,421,554	+				-0.4
3,421,562	+				+1.0
3,421,563	-				+1.4
3,421,610	-				+0.1
3,421,676	-		CA265_RS13675	0.12	+0.9
3,421,704	+		CA265_RS13675	0.13	-0.1
3,421,721	+		CA265_RS13675	0.13	+1.0
3,421,781	-		CA265_RS13675	0.15	+1.1
3,421,823	+		CA265_RS13675	0.17	+0.1
3,421,865	+		CA265_RS13675	0.18	+3.8
3,421,866	-		CA265_RS13675	0.18	-0.1
3,421,866	-		CA265_RS13675	0.18	-0.1
3,421,892	+		CA265_RS13675	0.19	+0.2
3,421,893	-		CA265_RS13675	0.19	+0.4
3,422,078	-		CA265_RS13675	0.25	+0.1
3,422,093	-		CA265_RS13675	0.26	+0.4
3,422,102	-		CA265_RS13675	0.26	+0.6
3,422,148	+		CA265_RS13675	0.28	-0.4
3,422,177	+		CA265_RS13675	0.29	+0.2
3,422,177	+		CA265_RS13675	0.29	-0.5
3,422,178	-		CA265_RS13675	0.29	-0.6
3,422,178	-		CA265_RS13675	0.29	+0.2
3,422,178	-		CA265_RS13675	0.29	-0.4
3,422,178	-		CA265_RS13675	0.29	-0.2
3,422,216	-		CA265_RS13675	0.30	+0.4
3,422,253	+		CA265_RS13675	0.31	+0.2
3,422,254	-		CA265_RS13675	0.31	+0.5
3,422,263	+		CA265_RS13675	0.32	-0.3
3,422,264	-		CA265_RS13675	0.32	+0.2
3,422,264	-		CA265_RS13675	0.32	+0.2
3,422,299	-		CA265_RS13675	0.33	+0.6
3,422,375	-		CA265_RS13675	0.36	+0.3
3,422,410	-		CA265_RS13675	0.37	+0.7
3,422,427	+		CA265_RS13675	0.37	-1.3
3,422,507	+		CA265_RS13675	0.40	-1.0
3,422,600	-		CA265_RS13675	0.43	+0.6
3,422,664	+		CA265_RS13675	0.45	-0.5
3,422,664	+		CA265_RS13675	0.45	-1.5
3,422,665	-		CA265_RS13675	0.46	+1.2
3,422,665	-		CA265_RS13675	0.46	+0.3
3,422,740	-		CA265_RS13675	0.48	+0.3
3,422,741	+		CA265_RS13675	0.48	-1.3
3,422,749	+		CA265_RS13675	0.48	+0.1
3,422,759	+		CA265_RS13675	0.49	+1.8
3,422,786	+		CA265_RS13675	0.50	-0.0
3,422,870	+		CA265_RS13675	0.53	-0.1
3,422,919	+		CA265_RS13675	0.54	+0.4
3,422,931	+		CA265_RS13675	0.55	+0.4
3,422,945	+		CA265_RS13675	0.55	+0.6
3,422,980	+		CA265_RS13675	0.56	-0.3
3,422,991	+		CA265_RS13675	0.57	-0.8
3,423,006	+		CA265_RS13675	0.57	+0.6
3,423,101	-		CA265_RS13675	0.60	+1.0
3,423,168	+		CA265_RS13675	0.63	-0.5
3,423,181	+		CA265_RS13675	0.63	-2.8
3,423,186	+		CA265_RS13675	0.63	+0.1
3,423,187	-		CA265_RS13675	0.63	-2.7
3,423,187	-		CA265_RS13675	0.63	-0.1
3,423,271	+		CA265_RS13675	0.66	-0.1
3,423,274	-		CA265_RS13675	0.66	-0.4
3,423,404	+		CA265_RS13675	0.71	-0.4
3,423,405	-		CA265_RS13675	0.71	+0.9
3,423,406	+		CA265_RS13675	0.71	+1.3
3,423,441	+		CA265_RS13675	0.72	-0.4
3,423,441	+		CA265_RS13675	0.72	-1.5
3,423,442	-		CA265_RS13675	0.72	-0.5
3,423,460	-		CA265_RS13675	0.73	+0.1
3,423,505	-		CA265_RS13675	0.74	+0.6
3,423,632	+		CA265_RS13675	0.79	+0.6
3,423,695	-		CA265_RS13675	0.81	+1.2
3,423,698	+		CA265_RS13675	0.81	+0.3
3,423,699	-		CA265_RS13675	0.81	-1.1
3,423,737	+		CA265_RS13675	0.82	-0.1
3,423,741	+		CA265_RS13675	0.82	+0.3
3,423,828	+		CA265_RS13675	0.85	-0.4
3,423,829	-		CA265_RS13675	0.85	-2.2
3,423,832	-		CA265_RS13675	0.86	+0.5
3,423,850	-		CA265_RS13675	0.86	+1.0
3,423,911	-		CA265_RS13675	0.88	-0.7
3,424,018	+				-0.0
3,424,137	+				-0.0
3,424,151	-				+0.1
3,424,175	+				+0.0
3,424,176	-				-1.7
3,424,176	-				-0.9
3,424,297	+				-0.8
3,424,297	+				-1.0
3,424,298	-				+1.0
3,424,302	+				-0.4
3,424,306	+				-0.9
3,424,437	-		CA265_RS13680	0.21	+1.8
3,424,437	-		CA265_RS13680	0.21	+1.0
3,424,449	-		CA265_RS13680	0.23	+1.8
3,424,465	+		CA265_RS13680	0.25	+0.3
3,424,470	-		CA265_RS13680	0.26	+0.8
3,424,487	+		CA265_RS13680	0.28	-1.5
3,424,509	-		CA265_RS13680	0.31	+1.3
3,424,574	+		CA265_RS13680	0.40	-0.0
3,424,575	-		CA265_RS13680	0.41	+0.9
3,424,580	-		CA265_RS13680	0.41	+0.6
3,424,607	+		CA265_RS13680	0.45	-0.7
3,424,608	-		CA265_RS13680	0.45	+2.2
3,424,608	-		CA265_RS13680	0.45	+0.4
3,424,628	+		CA265_RS13680	0.48	+0.3
3,424,629	-		CA265_RS13680	0.48	+1.4
3,424,671	+		CA265_RS13680	0.54	-0.1
3,424,697	-		CA265_RS13680	0.58	+0.3
3,424,698	+		CA265_RS13680	0.58	+0.3
3,424,698	+		CA265_RS13680	0.58	+0.3
3,424,699	-		CA265_RS13680	0.58	-0.4
3,424,700	+		CA265_RS13680	0.58	+0.1
3,424,700	+		CA265_RS13680	0.58	+0.6
3,424,701	-		CA265_RS13680	0.58	+0.7
3,424,808	+		CA265_RS13680	0.74	+0.2
3,424,840	+		CA265_RS13680	0.78	-0.0
3,424,841	-		CA265_RS13680	0.78	+0.7
3,424,841	-		CA265_RS13680	0.78	+0.9
3,424,851	-		CA265_RS13680	0.80	+0.6
3,424,859	+		CA265_RS13680	0.81	-0.0
3,424,860	-		CA265_RS13680	0.81	+2.0
3,424,897	+		CA265_RS13680	0.86	-0.4
3,424,985	-				+0.9
3,425,027	+				+0.5
3,425,076	+				+0.3
3,425,076	+				+0.1
3,425,077	-				+0.6
3,425,189	+				+3.2