Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13100
Experiment: R2A with Vancomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Vancomycin 0.06 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,260,839 | + | +0.0 | |||
| 3,261,632 | + | -0.1 | |||
| 3,261,687 | + | -0.6 | |||
| 3,261,687 | + | +0.6 | |||
| 3,261,688 | - | -1.0 | |||
| 3,261,688 | - | +0.9 | |||
| 3,261,700 | + | +1.1 | |||
| 3,261,714 | + | +0.2 | |||
| 3,261,714 | + | -2.1 | |||
| 3,262,459 | + | +0.6 | |||
| 3,262,460 | - | +0.9 | |||
| 3,262,500 | - | -0.5 | |||
| 3,262,553 | - | -0.4 | |||
| 3,262,553 | - | +0.4 | |||
| 3,262,629 | - | +0.3 | |||
| 3,262,654 | - | -3.1 | |||
| 3,262,655 | + | +0.2 | |||
| 3,262,655 | + | +0.7 | |||
| 3,262,656 | - | -1.5 |
Or see this region's nucleotide sequence